RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 VDRP11473 427 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 ATP2A2P16615 1042 aaKnown RBP10.25□□□□□ -0.77
MSH2-202ENST00000406134 GRIA1P42261 906 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 HADHQ16836 314 aaKnown RBP10.25□□□□□ -0.77
MSH2-202ENST00000406134 FAM91A1Q658Y4 838 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 MOB2Q70IA6 237 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 NLGN2Q8NFZ4 835 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 SIGLEC10Q96LC7 697 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 ZNF778Q96MU6 729 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 CNPY3Q9BT09 278 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 SNRNP25Q9BV90 132 aaKnown RBP10.25□□□□□ -0.77
MSH2-202ENST00000406134 BARX2Q9UMQ3 279 aaPredicted RBP10.25□□□□□ -0.77
MSH2-202ENST00000406134 LRRC42Q9Y546 428 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 SHROOM3Q8TF72 1996 aa10.25□□□□□ -0.77
MSH2-202ENST00000406134 PATJQ8NI35 1801 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 BCLAF3A2AJT9 711 aaKnown RBP10.24□□□□□ -0.77
MSH2-202ENST00000406134 PAPSS1O43252 624 aaPredicted RBP10.24□□□□□ -0.77
MSH2-202ENST00000406134 ECM2O94769 699 aaPredicted RBP10.24□□□□□ -0.77
MSH2-202ENST00000406134 TGDSO95455 350 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 MCF2P10911 925 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 ADORA2AP29274 412 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 PHBP35232 272 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 POU5F1BQ06416 359 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 HHATQ5VTY9 493 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 OTUD1Q5VV17 481 aaPredicted RBP10.24□□□□□ -0.77
MSH2-202ENST00000406134 SHKBP1Q8TBC3 707 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 KCNV2Q8TDN2 545 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 SLC35F5Q8WV83 523 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 HPDLQ96IR7 371 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 SLC4A5Q9BY07 1137 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 B3GNT5Q9BYG0 378 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 CYP3A43Q9HB55 503 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 SAR1AQ9NR31 198 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 ETNK2Q9NVF9 386 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 HESX1Q9UBX0 185 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 ZFP69BQ9UJL9 534 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 HTTP42858 3142 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 MCF2LO15068 1137 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 ATP5HO75947 161 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 VTNP04004 478 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 CALB2P22676 271 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 PTPN4P29074 926 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 SERPINB3P29508 390 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 ATICP31939 592 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 RPL34P49207 117 aaKnown RBP10.24□□□□□ -0.77
MSH2-202ENST00000406134 SLC8A3P57103 927 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 KHDC1Q4VXA5 237 aaKnown RBP10.24□□□□□ -0.77
MSH2-202ENST00000406134 C4orf50Q6ZRC1 276 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 TREML1Q86YW5 311 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 STK32AQ8WU08 396 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 CYTH2Q99418 400 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 TMEM120AQ9BXJ8 343 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 MKS1Q9NXB0 559 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 CYB561D2O14569 222 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 NDC80O14777 642 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 LPXNO60711 386 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 INSRRP14616 1297 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 ZNF200P98182 395 aaPredicted RBP10.24□□□□□ -0.77
MSH2-202ENST00000406134 OCRLQ01968 901 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 CDO1Q16878 200 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 UNC5AQ6ZN44 842 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 TMEM110Q86TL2 294 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 ALYREFQ86V81 257 aaKnown RBP10.24□□□□□ -0.77
MSH2-202ENST00000406134 PDIK1LQ8N165 341 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 CENPIQ92674 756 aaPredicted RBP10.24□□□□□ -0.77
MSH2-202ENST00000406134 C16orf70Q9BSU1 422 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 DPEP3Q9H4B8 488 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 SIRPGQ9P1W8 387 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 SLC17A6Q9P2U8 582 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 HEY2Q9UBP5 337 aa10.24□□□□□ -0.77
MSH2-202ENST00000406134 FAM237BA0A1B0GVD1 139 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 SMAPO00193 183 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 MAP3K13O43283 966 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 SMNDC1O75940 238 aaKnown RBP eCLIP10.23□□□□□ -0.77
MSH2-202ENST00000406134 VAV1P15498 845 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 STIP1P31948 543 aaKnown RBP10.23□□□□□ -0.77
MSH2-202ENST00000406134 L1CAMP32004 1257 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 CDK16Q00536 496 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 GBE1Q04446 702 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 TUBB3Q13509 450 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 ZBTB6Q15916 424 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 DARS2Q6PI48 645 aaKnown RBP10.23□□□□□ -0.77
MSH2-202ENST00000406134 UNC5BQ8IZJ1 945 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 WDR60Q8WVS4 1066 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 TEKT4Q8WW24 435 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 ALKBH8Q96BT7 664 aaKnown RBP10.23□□□□□ -0.77
MSH2-202ENST00000406134 SRPK1Q96SB4 655 aaKnown RBP10.23□□□□□ -0.77
MSH2-202ENST00000406134 GORASP1Q9BQQ3 440 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 TSSK1BQ9BXA7 367 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 ASNSD1Q9NWL6 643 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 ZNF180Q9UJW8 692 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 EMCNQ9ULC0 261 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 PLA2G4CQ9UP65 541 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 PTPRDP23468 1912 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 FAM159BA6NKW6 160 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 HBP1O60381 514 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 SNNO75324 88 aaPredicted RBP10.23□□□□□ -0.77
MSH2-202ENST00000406134 PDGFRAP16234 1089 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 ARRB2P32121 409 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 RGS7P49802 495 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms