RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TBCBQ99426 244 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 PARD6BQ9BYG5 372 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 OSBPL8Q9BZF1 889 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 POPDC2Q9HBU9 364 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 NGRNQ9NPE2 291 aaKnown RBP21.94■■□□□ 1.1
TPM1-208ENST00000404484 TMEM30AQ9NV96 361 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.94■■□□□ 1.1
TPM1-208ENST00000404484 ABI2Q9NYB9 513 aaPredicted RBP21.94■■□□□ 1.1
TPM1-208ENST00000404484 RRN3Q9NYV6 651 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 SPG21Q9NZD8 308 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 TRUB2O95900 331 aaKnown RBP21.93■■□□□ 1.1
TPM1-208ENST00000404484 CPB1P15086 417 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 TCF4P15884 667 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 NOS2P35228 1153 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 IRS1P35568 1242 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 GRIK1P39086 918 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 ATP11AP98196 1134 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 CDO1Q16878 200 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 C15orf59Q2T9L4 293 aaPredicted RBP21.93■■□□□ 1.1
TPM1-208ENST00000404484 BOLA3Q53S33 107 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 MAATS1Q7Z4T9 603 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 TMEM173Q86WV6 379 aaPredicted RBP21.93■■□□□ 1.1
TPM1-208ENST00000404484 KLHL7Q8IXQ5 586 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 SLC39A11Q8N1S5 342 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 TEKT4Q8WW24 435 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 CENPIQ92674 756 aaPredicted RBP21.93■■□□□ 1.1
TPM1-208ENST00000404484 TMEM169Q96HH4 297 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 SLITRK1Q96PX8 696 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 SLC2A13Q96QE2 648 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 RHOBTB2Q9BYZ6 727 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 ZWILCHQ9H900 591 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 HOMER3Q9NSC5 361 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 RAB21Q9UL25 225 aa21.93■■□□□ 1.1
TPM1-208ENST00000404484 LRRD1A4D1F6 860 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 PHF2O75151 1096 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 EFEMP2O95967 443 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 OR4Q2P0C623 313 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 CHRNA3P32297 505 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 NDUFV1P49821 464 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 GPR17Q13304 367 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 BRD3Q15059 726 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 SLC25A52Q3SY17 297 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 TCEAL5Q5H9L2 206 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 RTP2Q5QGT7 225 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 WDR93Q6P2C0 686 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 GPRIN1Q7Z2K8 1008 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 SPPL2BQ8TCT7 592 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 BCL7CQ8WUZ0 217 aaPredicted RBP21.92■■□□□ 1.1
TPM1-208ENST00000404484 C8orf48Q96LL4 319 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 LRRC1Q9BTT6 524 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 NSUN3Q9H649 340 aaKnown RBP21.92■■□□□ 1.1
TPM1-208ENST00000404484 STK39Q9UEW8 545 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 EFR3BQ9Y2G0 817 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 PATJQ8NI35 1801 aa21.92■■□□□ 1.1
TPM1-208ENST00000404484 TBC1D4O60343 1298 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 TJP3O95049 919 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 RALAP11233 206 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 CYP2F1P24903 491 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 PPM1AP35813 382 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 ERVFC1P60507 584 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 UBE3AQ05086 875 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 CYP1B1Q16678 543 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 PM20D1Q6GTS8 502 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 KIAA1841Q6NSI8 718 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 SPOCD1Q6ZMY3 1216 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.91■■□□□ 1.1
TPM1-208ENST00000404484 RNF168Q8IYW5 571 aaPredicted RBP21.91■■□□□ 1.1
TPM1-208ENST00000404484 DEFB106AQ8N104 65 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 PIK3R5Q8WYR1 880 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 RNF25Q96BH1 459 aaPredicted RBP21.91■■□□□ 1.1
TPM1-208ENST00000404484 STIM2Q9P246 746 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 PCSK1NQ9UHG2 260 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 BACE2Q9Y5Z0 518 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 USP3Q9Y6I4 520 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 CAPN9O14815 690 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 USP17L7P0C7H9 530 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 H2AFXP16104 143 aaPredicted RBP21.91■■□□□ 1.1
TPM1-208ENST00000404484 IL1R2P27930 398 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 KRT17Q04695 432 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 ATP13A4Q4VNC1 1196 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 TFDP3Q5H9I0 405 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 ADAT2Q7Z6V5 191 aaKnown RBP21.91■■□□□ 1.1
TPM1-208ENST00000404484 C12orf50Q8NA57 414 aaPredicted RBP21.91■■□□□ 1.1
TPM1-208ENST00000404484 CMASQ8NFW8 434 aaPredicted RBP21.91■■□□□ 1.1
TPM1-208ENST00000404484 B3GALT6Q96L58 329 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 DDX47Q9H0S4 455 aaKnown RBP21.91■■□□□ 1.1
TPM1-208ENST00000404484 EPC1Q9H2F5 836 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 MTRRQ9UBK8 725 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 LZTS1Q9Y250 596 aa21.91■■□□□ 1.1
TPM1-208ENST00000404484 CCDC151A5D8V7 595 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 ERLIN1O75477 346 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 LTFP02788 710 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 SOD2P04179 222 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 SULT1E1P49888 294 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 CDR1P51861 262 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 DHX34Q14147 1143 aaKnown RBP21.9■■□□□ 1.1
TPM1-208ENST00000404484 DCAF6Q58WW2 860 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 TXNRD3NBQ6F5E7 133 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 MFSD7Q6UXD7 560 aa21.9■■□□□ 1.1
TPM1-208ENST00000404484 BEND5Q7L4P6 421 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms