RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ADORA2AP29274 412 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 RAP1GDS1P52306 607 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 PGM5Q15124 567 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 FASTKD1Q53R41 847 aaKnown RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 CMPK2Q5EBM0 449 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 TNS4Q8IZW8 715 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 DEPTORQ8TB45 409 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 PRPF31Q8WWY3 499 aaKnown RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 XAB2Q9HCS7 855 aaKnown RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 HBS1LQ9Y450 684 aaKnown RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 PCDHA10Q9Y5I2 948 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 HOXA10P31260 410 aaPredicted RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 ROR1Q01973 937 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 PRKCEQ02156 737 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 FOLH1Q04609 750 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 PRKG1Q13976 671 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 PPP2R5DQ14738 602 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 DLGAP5Q15398 846 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 TTC39BQ5VTQ0 682 aaPredicted RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 ATG14Q6ZNE5 492 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 PCGF5Q86SE9 256 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 ZBTB46Q86UZ6 589 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 SPNS2Q8IVW8 549 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 CLEC4DQ8WXI8 215 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 USP13Q92995 863 aaPredicted RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 CPXM1Q96SM3 734 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 NGRNQ9NPE2 291 aaKnown RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 KCNK4Q9NYG8 393 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 TMOD2Q9NZR1 351 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 CNTN3Q9P232 1028 aa9.93□□□□□ -0.82
SMC1B-202ENST00000404354 RPL26L1Q9UNX3 145 aaKnown RBP9.93□□□□□ -0.82
SMC1B-202ENST00000404354 CCDC78A2IDD5 438 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 MAGEC1O60732 1142 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 SAT1P21673 171 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 PMLP29590 882 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 CHRNA5P30532 468 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 SERPINB5P36952 375 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 CAP2P40123 477 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 PKNOX1P55347 436 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 COG7P83436 770 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 TRPC3Q13507 836 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 CCNIQ14094 377 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 CYTH1Q15438 398 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 ZC3H12AQ5D1E8 599 aaKnown RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 ATG16L1Q676U5 607 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 C15orf39Q6ZRI6 1047 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 PIWIL1Q96J94 861 aaKnown RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 NR1H4Q96RI1 486 aaPredicted RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 DHRS4Q9BTZ2 278 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 CCDC106Q9BWC9 280 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 TBC1D22BQ9NU19 505 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 APOBEC2Q9Y235 224 aaKnown RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 AFG3L2Q9Y4W6 797 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 C3orf70A6NLC5 250 aaPredicted RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 RFPL1O75677 317 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 CALB1P05937 261 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 CRABP2P29373 138 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 RGS7P49802 495 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 GALK1P51570 392 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 SESN2P58004 480 aaPredicted RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 YWHAZP63104 245 aaKnown RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 PIGHQ14442 188 aaPredicted RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 PDK1Q15118 436 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 HADHQ16836 314 aaKnown RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 CCDC142Q17RM4 750 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 Q3C1V9 767 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 PODNQ7Z5L7 613 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 PDSS2Q86YH6 399 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 FAM156AQ8NDB6 213 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 FAM172AQ8WUF8 416 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 DEPDC1BQ8WUY9 529 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 ZNF778Q96MU6 729 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 PRPF18Q99633 342 aaKnown RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 UNKQ9C0B0 810 aaKnown RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 MMADHCQ9H3L0 296 aaPredicted RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 UBIAD1Q9Y5Z9 338 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 TEX264Q9Y6I9 313 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 FAM200BP0CF97 657 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 STIP1P31948 543 aaKnown RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 MRPS22P82650 360 aaKnown RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 PSMD6Q15008 389 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 FAM102AQ5T9C2 384 aaPredicted RBP9.92□□□□□ -0.82
SMC1B-202ENST00000404354 FRMD7Q6ZUT3 714 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 SH2D5Q6ZV89 423 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 TRIM74Q86UV6 250 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 TRIM73Q86UV7 250 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 KCTD17Q8N5Z5 321 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 STKLD1Q8NE28 680 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 MARK4Q96L34 752 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 FAM192AQ9GZU8 254 aa9.92□□□□□ -0.82
SMC1B-202ENST00000404354 C15orf38-AP3S2A0A0A6YYH1 394 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 COPAP53621 1224 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 SLC25A11Q02978 314 aaKnown RBP9.91□□□□□ -0.82
SMC1B-202ENST00000404354 SLC18A2Q05940 514 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 TLR1Q15399 786 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 DNAL1Q4LDG9 190 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 N4BP2L1Q5TBK1 243 aaPredicted RBP9.91□□□□□ -0.82
SMC1B-202ENST00000404354 TRIM72Q6ZMU5 477 aa9.91□□□□□ -0.82
SMC1B-202ENST00000404354 EEPD1Q7L9B9 569 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms