RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 RPL34P49207 117 aaKnown RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 SF3A3Q12874 501 aaKnown RBP eCLIP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 KCNJ11Q14654 390 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 CST9Q5W186 159 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 TOP6BLQ8N6T0 577 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 SMG8Q8ND04 991 aaKnown RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 RTP4Q96DX8 246 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 WDR83Q9BRX9 315 aaKnown RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 C11orf84Q9BUA3 381 aaPredicted RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 DHX35Q9H5Z1 703 aaKnown RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 BCLAF3A2AJT9 711 aaKnown RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 SNX3O60493 162 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 SPAG7O75391 227 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 CAPN15O75808 1086 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 GHRP10912 638 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 WARSP23381 471 aaKnown RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 ZNF157P51786 506 aaPredicted RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 SLC8A3P57103 927 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 PURAQ00577 322 aaKnown RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 EFTUD2Q15029 972 aaKnown RBP eCLIP18.61■□□□□ 0.571e-8■■■■□ 26.2
CHTOP-205ENST00000403433 DPYSL2Q16555 572 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 LACTB2Q53H82 288 aaPredicted RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 TAF2Q6P1X5 1199 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 LIMS2Q7Z4I7 341 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 CDKL3Q8IVW4 592 aaPredicted RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 B3GALNT2Q8NCR0 500 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 FBF1Q8TES7 1133 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 CENPIQ92674 756 aaPredicted RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 NRDE2Q9H7Z3 1164 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 USP29Q9HBJ7 922 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 RAB6BQ9NRW1 208 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 CHMP2BQ9UQN3 213 aa18.61■□□□□ 0.57
CHTOP-205ENST00000403433 USP15Q9Y4E8 981 aaPredicted RBP18.61■□□□□ 0.57
CHTOP-205ENST00000403433 M0QZ92 97 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 XPO1O14980 1071 aaKnown RBP18.6■□□□□ 0.57
CHTOP-205ENST00000403433 OAS1P00973 400 aaKnown RBP18.6■□□□□ 0.57
CHTOP-205ENST00000403433 ZFXP17010 805 aaPredicted RBP18.6■□□□□ 0.57
CHTOP-205ENST00000403433 RBL1P28749 1068 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 HOXC8P31273 242 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 SLC18A1P54219 525 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 LILRA4P59901 499 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 MTM1Q13496 603 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 ZKSCAN8Q15776 578 aaPredicted RBP18.6■□□□□ 0.57
CHTOP-205ENST00000403433 PACS2Q86VP3 889 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 FAM228AQ86W67 206 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 ARRDC4Q8NCT1 418 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 PAIP2Q9BPZ3 127 aaKnown RBP18.6■□□□□ 0.57
CHTOP-205ENST00000403433 KLC2Q9H0B6 622 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 KIF9Q9HAQ2 790 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 AP4E1Q9UPM8 1137 aa18.6■□□□□ 0.57
CHTOP-205ENST00000403433 TRPM7Q96QT4 1865 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 TKTP29401 623 aaKnown RBP18.59■□□□□ 0.57
CHTOP-205ENST00000403433 LRPAP1P30533 357 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 L1CAMP32004 1257 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 EFHC1Q5JVL4 640 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 C4orf33Q8N1A6 199 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 PAFAH2Q99487 392 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 FRMD8Q9BZ67 464 aaPredicted RBP18.59■□□□□ 0.57
CHTOP-205ENST00000403433 TNPO2O14787 897 aaKnown RBP18.59■□□□□ 0.57
CHTOP-205ENST00000403433 ATP2C2O75185 946 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 SUN1O94901 812 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 AKR1A1P14550 325 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 GBP2P32456 591 aaPredicted RBP18.59■□□□□ 0.57
CHTOP-205ENST00000403433 ELK3P41970 407 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 MSH2P43246 934 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 ATXN1P54253 815 aaKnown RBP18.59■□□□□ 0.57
CHTOP-205ENST00000403433 SPARCL1Q14515 664 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 C17orf99Q6UX52 265 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 OSTM1Q86WC4 334 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 DHRS4Q9BTZ2 278 aa18.59■□□□□ 0.57
CHTOP-205ENST00000403433 CYB561D2O14569 222 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 SPAG6O75602 509 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 MAP3K6O95382 1288 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 CA4P22748 312 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 WDR4P57081 412 aaKnown RBP18.58■□□□□ 0.56
CHTOP-205ENST00000403433 MRPS6P82932 125 aaKnown RBP18.58■□□□□ 0.56
CHTOP-205ENST00000403433 ADIGQ0VDE8 80 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 SPRED3Q2MJR0 410 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 ADGRD1Q6QNK2 874 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 C4orf22Q6V702 233 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 STRADAQ7RTN6 431 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 SPATA21Q7Z572 469 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 PIGZQ86VD9 579 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 CNPY4Q8N129 248 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 HNRNPABQ99729 332 aaKnown RBP18.58■□□□□ 0.56
CHTOP-205ENST00000403433 DUSP16Q9BY84 665 aa18.58■□□□□ 0.56
CHTOP-205ENST00000403433 DNM1LO00429 736 aa18.57■□□□□ 0.56
CHTOP-205ENST00000403433 PTGESO14684 152 aa18.57■□□□□ 0.56
CHTOP-205ENST00000403433 KPNA6O60684 536 aa18.57■□□□□ 0.56
CHTOP-205ENST00000403433 TOMM70O94826 608 aa18.57■□□□□ 0.56
CHTOP-205ENST00000403433 ASMTLO95671 621 aa18.57■□□□□ 0.56
CHTOP-205ENST00000403433 C6orf222P0C671 652 aaPredicted RBP18.57■□□□□ 0.56
CHTOP-205ENST00000403433 MATKP42679 507 aa18.57■□□□□ 0.56
CHTOP-205ENST00000403433 SCTRP47872 440 aa18.57■□□□□ 0.56
CHTOP-205ENST00000403433 NR2C2P49116 596 aa18.57■□□□□ 0.56
CHTOP-205ENST00000403433 SULT1E1P49888 294 aa18.57■□□□□ 0.56
CHTOP-205ENST00000403433 XRCC4Q13426 336 aa18.57■□□□□ 0.56
CHTOP-205ENST00000403433 SLC45A4Q5BKX6 768 aa18.57■□□□□ 0.56
CHTOP-205ENST00000403433 SYCP2LQ5T4T6 812 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms