RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 MSCO60682 206 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 SKIP12755 728 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 TUBP50607 506 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 RAP1GDS1P52306 607 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 EFNA5P52803 228 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 NOMO1Q15155 1222 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 TARBP2Q15633 366 aaKnown RBP20.61■□□□□ 0.89
CCDC47-202ENST00000403162 ZRSR2Q15696 482 aaKnown RBP20.61■□□□□ 0.89
CCDC47-202ENST00000403162 TTC39BQ5VTQ0 682 aaPredicted RBP20.61■□□□□ 0.89
CCDC47-202ENST00000403162 SLC26A11Q86WA9 606 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 XYLT1Q86Y38 959 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 SCG3Q8WXD2 468 aaKnown RBP20.61■□□□□ 0.89
CCDC47-202ENST00000403162 STMN2Q93045 179 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 ARHGEF4Q9NR80 690 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 METTL5Q9NRN9 209 aaKnown RBP20.61■□□□□ 0.89
CCDC47-202ENST00000403162 KCNK4Q9NYG8 393 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 LRRC37A2A6NM11 1700 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 COPEO14579 308 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 TBX10O75333 385 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 TRUB2O95900 331 aaKnown RBP20.61■□□□□ 0.89
CCDC47-202ENST00000403162 C1QAP02745 245 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 FESP07332 822 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 CTGFP29279 349 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 MIPP30301 263 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 YWHAGP61981 247 aaKnown RBP eCLIP20.61■□□□□ 0.89
CCDC47-202ENST00000403162 TMEM154Q6P9G4 183 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 EP400NLQ6ZTU2 488 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 ZBTB33Q86T24 672 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 TTC7BQ86TV6 843 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 TRIM42Q8IWZ5 723 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 EMC1Q8N766 993 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 WDR60Q8WVS4 1066 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 C7orf26Q96N11 449 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 SRPK1Q96SB4 655 aaKnown RBP20.61■□□□□ 0.89
CCDC47-202ENST00000403162 ZNF212Q9UDV6 495 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 ZNF180Q9UJW8 692 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 CPSF3Q9UKF6 684 aaKnown RBP20.61■□□□□ 0.89
CCDC47-202ENST00000403162 MAGEC1O60732 1142 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 FCGRTP55899 365 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 MXRA7P84157 204 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 AP1B1Q10567 949 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 APBB2Q92870 758 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 CPXM1Q96SM3 734 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 FRMD8Q9BZ67 464 aaPredicted RBP20.6■□□□□ 0.89
CCDC47-202ENST00000403162 ARHGAP39Q9C0H5 1083 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 NMUR2Q9GZQ4 415 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 VCXQ9H320 206 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 PCSK1NQ9UHG2 260 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 PPME1Q9Y570 386 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 ASB3Q9Y575 518 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 MCM3APO60318 1980 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 ZNF236Q9UL36 1845 aa20.6■□□□□ 0.89
CCDC47-202ENST00000403162 AHCYL1O43865 530 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 SP100P23497 879 aaPredicted RBP20.59■□□□□ 0.89
CCDC47-202ENST00000403162 DARS2Q6PI48 645 aaKnown RBP20.59■□□□□ 0.89
CCDC47-202ENST00000403162 HSPH1Q92598 858 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 ACO2Q99798 780 aaKnown RBP20.59■□□□□ 0.89
CCDC47-202ENST00000403162 TCHPQ9BT92 498 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 CALN1Q9BXU9 219 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 IQCGQ9H095 443 aaKnown RBP20.59■□□□□ 0.89
CCDC47-202ENST00000403162 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.59■□□□□ 0.89
CCDC47-202ENST00000403162 USP18Q9UMW8 372 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 TTLL3Q9Y4R7 772 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 DOCK3Q8IZD9 2030 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 FAM237BA0A1B0GVD1 139 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 C2orf71A6NGG8 1288 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 CAPN14A8MX76 684 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 E5RJQ4 531 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 RNF8O76064 485 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 ENDOD1O94919 500 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 ERBB2P04626 1255 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 HOXC6P09630 235 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 CD19P15391 556 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 CYP2B6P20813 491 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 PGM1P36871 562 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 CDK18Q07002 472 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 TAF5Q15542 800 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 MAMDC4Q6UXC1 1216 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 SOCS4Q8WXH5 440 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 MKS1Q9NXB0 559 aa20.59■□□□□ 0.89
CCDC47-202ENST00000403162 TRIM49D1C9J1S8 452 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 F8W8V4 182 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 I3L4J1 428 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 KRT37O76014 449 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 SNRPAP09012 282 aaKnown RBP20.58■□□□□ 0.89
CCDC47-202ENST00000403162 TGFB3P10600 412 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 UBA1P22314 1058 aaKnown RBP20.58■□□□□ 0.89
CCDC47-202ENST00000403162 RGS2P41220 211 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 NRLP54845 237 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 TFAMQ00059 246 aaKnown RBP20.58■□□□□ 0.89
CCDC47-202ENST00000403162 SP3Q02447 781 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 C11orf91Q3C1V1 193 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 CDHR3Q6ZTQ4 885 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 TMPRSS6Q8IU80 811 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 SLC4A11Q8NBS3 891 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 PPFIBP2Q8ND30 876 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 CCDC110Q8TBZ0 833 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 USP6NLQ92738 828 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 TINF2Q9BSI4 451 aa20.58■□□□□ 0.89
CCDC47-202ENST00000403162 GJD2Q9UKL4 321 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms