RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 SND1Q7KZF4 910 aaKnown RBP eCLIP13.87□□□□□ -0.196e-9■□□□□ 9.5
CEACAM1-206ENST00000403136 BHLHA9Q7RTU4 235 aa13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 TAS1R1Q7RTX1 841 aa13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 BNIPLQ7Z465 357 aa13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 TMEM199Q8N511 208 aa13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 GRK7Q8WTQ7 553 aa13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 BCL7CQ8WUZ0 217 aaPredicted RBP13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 GDAP1L1Q96MZ0 367 aa13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 FAM118BQ9BPY3 351 aa13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 SNRNP25Q9BV90 132 aaKnown RBP13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 MAK16Q9BXY0 300 aaKnown RBP13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 TRIM31Q9BZY9 425 aa13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 ABI2Q9NYB9 513 aaPredicted RBP13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 CALCOCO1Q9P1Z2 691 aa13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 DRG1Q9Y295 367 aaKnown RBP13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 PCDHB5Q9Y5E4 795 aa13.87□□□□□ -0.19
CEACAM1-206ENST00000403136 H7C4K7 107 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 M0QYT0 321 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 TNFRSF10BO14763 440 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 LIASO43766 372 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 EFCAB14O75071 495 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 FAM153BP0C7A2 387 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 IL4RP24394 825 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 ECHS1P30084 290 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 TNNT3P45378 269 aaPredicted RBP13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 PITX1P78337 314 aaPredicted RBP13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 MMRN1Q13201 1228 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 DPYSL3Q14195 570 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 KRT81Q14533 505 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 CA9Q16790 459 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 FAM153CQ494X1 144 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 RTP2Q5QGT7 225 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 VSTM1Q6UX27 236 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 SYDE1Q6ZW31 735 aaPredicted RBP13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 RFX6Q8HWS3 928 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 SCN4BQ8IWT1 228 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 TTC13Q8NBP0 860 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 FAM71BQ8TC56 605 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 CAVIN3Q969G5 261 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 ZNF689Q96CS4 500 aaPredicted RBP13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 TTPALQ9BTX7 342 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 OXCT2Q9BYC2 517 aaPredicted RBP13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 PCDH18Q9HCL0 1135 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 GPATCH2LQ9NWQ4 482 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 FAM153AQ9UHL3 310 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 SNX24Q9Y343 169 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 TSC2P49815 1807 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 EFEMP2O95967 443 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 NCAM1P13591 858 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 DYNLT1P63172 113 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 LMNB2Q03252 620 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 GPR17Q13304 367 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 NNTQ13423 1086 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 BYSLQ13895 437 aaKnown RBP13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 PPP1R7Q15435 360 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 OTUD1Q5VV17 481 aaPredicted RBP13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 BSPRYQ5W0U4 402 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 ANKS3Q6ZW76 656 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 VSIG1Q86XK7 387 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 SCAMP5Q8TAC9 235 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 C8orf48Q96LL4 319 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 RNF157Q96PX1 679 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 FRMD8P1Q9BZ68 369 aaPredicted RBP13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 RRN3Q9NYV6 651 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 DNPEPQ9ULA0 475 aa13.86□□□□□ -0.19
CEACAM1-206ENST00000403136 GAS8O95995 478 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 ACRP10323 421 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 L1CAMP32004 1257 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 RDXP35241 583 aaKnown RBP13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 MAGEA11P43364 429 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 SLC5A3P53794 718 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 ARPP19P56211 112 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 DEFB103AP81534 67 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 KRT17Q04695 432 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 DEUP1Q05D60 604 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 TFDP2Q14188 446 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 DPYSL2Q16555 572 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 RSPO2Q6UXX9 243 aaPredicted RBP13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 FAM131BQ86XD5 332 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 PSTKQ8IV42 348 aaKnown RBP13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 CCDC185Q8N715 623 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 ATAD1Q8NBU5 361 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 ACTL9Q8TC94 416 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 NKD2Q969F2 451 aaPredicted RBP13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 HAUS1Q96CS2 278 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 IGSF21Q96ID5 467 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 CCDC114Q96M63 670 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 PGLYRP2Q96PD5 576 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 NEUROG2Q9H2A3 272 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 FAM53CQ9NYF3 392 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 ZNF148Q9UQR1 794 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 NEU2Q9Y3R4 380 aa13.85□□□□□ -0.19
CEACAM1-206ENST00000403136 ZNF487B1APH4 448 aa13.84□□□□□ -0.19
CEACAM1-206ENST00000403136 GBP1P32455 592 aa13.84□□□□□ -0.19
CEACAM1-206ENST00000403136 RPL21P46778 160 aaKnown RBP13.84□□□□□ -0.19
CEACAM1-206ENST00000403136 VCPP55072 806 aaKnown RBP13.84□□□□□ -0.19
CEACAM1-206ENST00000403136 WDR5P61964 334 aaKnown RBP13.84□□□□□ -0.19
CEACAM1-206ENST00000403136 OTUD4Q01804 1114 aaKnown RBP13.84□□□□□ -0.19
CEACAM1-206ENST00000403136 SMARCB1Q12824 385 aa13.84□□□□□ -0.19
CEACAM1-206ENST00000403136 NME3Q13232 169 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms