RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 BPIFB4P59827 614 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 UBXN1Q04323 297 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 RAPGEF1Q13905 1077 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 SYCP1Q15431 976 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 TADA2BQ86TJ2 420 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 SIX6OS1Q8N1H7 587 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 TTC16Q8NEE8 873 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 ATP2A3Q93084 1043 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 KLF16Q9BXK1 252 aaPredicted RBP20.17■□□□□ 0.82
RTN4-207ENST00000402434 KCNH6Q9H252 994 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 DLGAP2Q9P1A6 1054 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 DNMT3LQ9UJW3 386 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 MUC6Q6W4X9 2439 aa20.17■□□□□ 0.82
RTN4-207ENST00000402434 FAM170BA6NMN3 283 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 SPECC1L-ADORA2AF8WAN1 911 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 CTHP32929 405 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 SOX9P48436 509 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 IFNAR2P48551 515 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 DAOAP59103 153 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 YWHAGP61981 247 aaKnown RBP eCLIP20.16■□□□□ 0.82
RTN4-207ENST00000402434 C10orf120Q5SQS8 335 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 SLC47A2Q86VL8 602 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 CCDC105Q8IYK2 499 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 IRGQQ8WZA9 623 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 FAM3CQ92520 227 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 NDRG1Q92597 394 aaKnown RBP20.16■□□□□ 0.82
RTN4-207ENST00000402434 SLC4A5Q9BY07 1137 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 LHX5Q9H2C1 402 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 ECT2Q9H8V3 914 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 CBX8Q9HC52 389 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 FAM207AQ9NSI2 230 aaPredicted RBP20.16■□□□□ 0.82
RTN4-207ENST00000402434 NUDT5Q9UKK9 219 aa20.16■□□□□ 0.82
RTN4-207ENST00000402434 YJEFN3A6XGL0 299 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 E7ENQ6 273 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 F8VZ95 297 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 SLC9A3R1O14745 358 aaPredicted RBP20.15■□□□□ 0.82
RTN4-207ENST00000402434 EPHB6O15197 1021 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 GREM1O60565 184 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 LCP1P13796 627 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 TARSP26639 723 aaKnown RBP20.15■□□□□ 0.82
RTN4-207ENST00000402434 FZD5Q13467 585 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 UBXN2BQ14CS0 331 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 TXNDC11Q6PKC3 985 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 TMEM110Q86TL2 294 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 ADGRG2Q8IZP9 1017 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 WDTC1Q8N5D0 677 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 TTC8Q8TAM2 541 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 CLDN23Q96B33 292 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 CHFRQ96EP1 664 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 RTN4Q9NQC3 1192 aaKnown RBP20.15■□□□□ 0.82
RTN4-207ENST00000402434 TBC1D14Q9P2M4 693 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 CYTH4Q9UIA0 394 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 HCN4Q9Y3Q4 1203 aa20.15■□□□□ 0.82
RTN4-207ENST00000402434 ARIH1Q9Y4X5 557 aaPredicted RBP20.15■□□□□ 0.82
RTN4-207ENST00000402434 CACNA1HO95180 2353 aa20.14■□□□□ 0.82
RTN4-207ENST00000402434 FBXO21O94952 628 aa20.14■□□□□ 0.81
RTN4-207ENST00000402434 ACADSBP45954 432 aa20.14■□□□□ 0.81
RTN4-207ENST00000402434 NFKBIBQ15653 356 aa20.14■□□□□ 0.81
RTN4-207ENST00000402434 BSPRYQ5W0U4 402 aa20.14■□□□□ 0.81
RTN4-207ENST00000402434 HTR3DQ70Z44 454 aa20.14■□□□□ 0.81
RTN4-207ENST00000402434 CPA6Q8N4T0 437 aa20.14■□□□□ 0.81
RTN4-207ENST00000402434 OTUB2Q96DC9 234 aa20.14■□□□□ 0.81
RTN4-207ENST00000402434 PRRX2Q99811 253 aa20.14■□□□□ 0.81
RTN4-207ENST00000402434 NFATC1O95644 943 aa20.13■□□□□ 0.81
RTN4-207ENST00000402434 DCNP07585 359 aaKnown RBP20.13■□□□□ 0.81
RTN4-207ENST00000402434 CYP11B1P15538 503 aa20.13■□□□□ 0.81
RTN4-207ENST00000402434 JAM2P57087 298 aa20.13■□□□□ 0.81
RTN4-207ENST00000402434 POLR2FP61218 127 aaKnown RBP20.13■□□□□ 0.81
RTN4-207ENST00000402434 BTBD8Q5XKL5 378 aa20.13■□□□□ 0.81
RTN4-207ENST00000402434 LUZP1Q86V48 1076 aa20.13■□□□□ 0.81
RTN4-207ENST00000402434 SCUBE3Q8IX30 993 aa20.13■□□□□ 0.81
RTN4-207ENST00000402434 WBP2Q969T9 261 aa20.13■□□□□ 0.81
RTN4-207ENST00000402434 ABCC13Q9NSE7 274 aa20.13■□□□□ 0.81
RTN4-207ENST00000402434 SH3BP1Q9Y3L3 701 aa20.13■□□□□ 0.81
RTN4-207ENST00000402434 PIK3R2O00459 728 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 MDM4O15151 490 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 NCAM2O15394 837 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 GJA4P35212 333 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 KRT9P35527 623 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 RPS9P46781 194 aaKnown RBP20.12■□□□□ 0.81
RTN4-207ENST00000402434 COG7P83436 770 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 AMPD2Q01433 879 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 NR1H3Q13133 447 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 PDCLQ13371 301 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 NEK11Q8NG66 645 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 CLEC4CQ8WTT0 213 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 DDX1Q92499 740 aaKnown RBP20.12■□□□□ 0.81
RTN4-207ENST00000402434 ST7Q9NRC1 585 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 OLA1Q9NTK5 396 aaKnown RBP20.12■□□□□ 0.81
RTN4-207ENST00000402434 RAPGEFL1Q9UHV5 662 aa20.12■□□□□ 0.81
RTN4-207ENST00000402434 TRDMT1O14717 391 aaKnown RBP20.11■□□□□ 0.81
RTN4-207ENST00000402434 SCAMP3O14828 347 aaKnown RBP20.11■□□□□ 0.81
RTN4-207ENST00000402434 TEX33O43247 280 aa20.11■□□□□ 0.81
RTN4-207ENST00000402434 MAGEA9P43362 315 aa20.11■□□□□ 0.81
RTN4-207ENST00000402434 GOLGA8FQ08AF8 430 aa20.11■□□□□ 0.81
RTN4-207ENST00000402434 GOLGA8DPQ0D2H9 430 aa20.11■□□□□ 0.81
RTN4-207ENST00000402434 EFEMP1Q12805 493 aa20.11■□□□□ 0.81
RTN4-207ENST00000402434 RSRC2Q7L4I2 434 aaKnown RBP20.11■□□□□ 0.81
RTN4-207ENST00000402434 MIB1Q86YT6 1006 aa20.11■□□□□ 0.81
RTN4-207ENST00000402434 DTWD2Q8NBA8 298 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms