RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 PACSIN3Q9UKS6 424 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 A0A087WZ62 844 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 ARHGAP42A6NI28 874 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 FAM155BO75949 473 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 EPHB1P54762 984 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 INHBCP55103 352 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 SLC25A11Q02978 314 aaKnown RBP14.67□□□□□ -0.06
ATG3-202ENST00000402314 RASA2Q15283 850 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 CCDC33Q8N5R6 958 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 ANKRD36BP1Q96IX9 119 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 FDXACB1Q9BRP7 624 aaPredicted RBP14.67□□□□□ -0.06
ATG3-202ENST00000402314 WDR83Q9BRX9 315 aaKnown RBP14.67□□□□□ -0.06
ATG3-202ENST00000402314 PTPRHQ9HD43 1115 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 RBPJLQ9UBG7 517 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 GINS2Q9Y248 185 aa14.67□□□□□ -0.06
ATG3-202ENST00000402314 ACKR2O00590 384 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 GPX6P59796 221 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 PIGHQ14442 188 aaPredicted RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 ZRSR2Q15696 482 aaKnown RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 C15orf59Q2T9L4 293 aaPredicted RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.66□□□□□ -0.06
ATG3-202ENST00000402314 ZNF667Q5HYK9 610 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 POU5F2Q8N7G0 328 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 C12orf29Q8N999 325 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 RBM15BQ8NDT2 890 aaKnown RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 STX18Q9P2W9 335 aaKnown RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 M0QYV0 167 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 TCEA3O75764 348 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 ANPEPP15144 967 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 RGS7P49802 495 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 MXD4Q14582 209 aaPredicted RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 MAP1SQ66K74 1059 aaPredicted RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 SATL1Q86VE3 508 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 SLC4A11Q8NBS3 891 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 GSTCDQ8NEC7 633 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 PYROXD1Q8WU10 500 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 ZFAND2BQ8WV99 257 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 PAFAH2Q99487 392 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 LPIN3Q9BQK8 851 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 RPF1Q9H9Y2 349 aaKnown RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 CYLDQ9NQC7 956 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 DDX18Q9NVP1 670 aaKnown RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 GPATCH2LQ9NWQ4 482 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 GALNT8Q9NY28 637 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 SMG5Q9UPR3 1016 aaKnown RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 RGPD3A6NKT7 1758 aaPredicted RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 RGPD4Q7Z3J3 1758 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 PRPF4O43172 522 aaKnown RBP eCLIP14.66□□□□□ -0.06
ATG3-202ENST00000402314 CREB3O43889 395 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 TMEM63AO94886 807 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 LSM8O95777 96 aaKnown RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 STAG3L1P0CL83 205 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 EIF4BP23588 611 aaKnown RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 MIPP30301 263 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 RPL22P35268 128 aaKnown RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 MBTD1Q05BQ5 628 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 PEX6Q13608 980 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 RFX6Q8HWS3 928 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 BBOF1Q8ND07 529 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 SLC35B2Q8TB61 432 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 CPT1BQ92523 772 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 PANX3Q96QZ0 392 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 SPATA16Q9BXB7 569 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 SLC13A1Q9BZW2 595 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 KCNK13Q9HB14 408 aa14.66□□□□□ -0.06
ATG3-202ENST00000402314 PSMC3IPQ9P2W1 217 aaPredicted RBP14.66□□□□□ -0.06
ATG3-202ENST00000402314 CLUHO75153 1309 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 USP46P62068 366 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 TRNP1Q6NT89 227 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 TSHZ1Q6ZSZ6 1077 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 XYLT1Q86Y38 959 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 KCTD6Q8NC69 237 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 SNRNP27Q8WVK2 155 aaKnown RBP14.65□□□□□ -0.06
ATG3-202ENST00000402314 ABTB1Q969K4 478 aaPredicted RBP14.65□□□□□ -0.06
ATG3-202ENST00000402314 OPTNQ96CV9 577 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 HEXIM2Q96MH2 286 aaKnown RBP14.65□□□□□ -0.06
ATG3-202ENST00000402314 RILPQ96NA2 401 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 PEBP4Q96S96 227 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 FZD8Q9H461 694 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 CYP4F11Q9HBI6 524 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 CHMP2BQ9UQN3 213 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 MGAMO43451 1857 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 IGKV6-21A0A0C4DH24 114 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 MYOCOSA0A1B0GUC4 107 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 TRAFD1O14545 582 aaPredicted RBP14.65□□□□□ -0.06
ATG3-202ENST00000402314 CYB561D2O14569 222 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 LPXNO60711 386 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 PDE5AO76074 875 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 MICAL2O94851 1124 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 ZNF286BP0CG31 522 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 TGFB3P10600 412 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 INSRRP14616 1297 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 PROZP22891 400 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 KDELR1P24390 212 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 POLR2BP30876 1174 aaKnown RBP14.65□□□□□ -0.06
ATG3-202ENST00000402314 BASP1P80723 227 aaKnown RBP14.65□□□□□ -0.06
ATG3-202ENST00000402314 BTKQ06187 659 aa14.65□□□□□ -0.06
ATG3-202ENST00000402314 FAM102AQ5T9C2 384 aaPredicted RBP14.65□□□□□ -0.06
ATG3-202ENST00000402314 RGS9BPQ6ZS82 235 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms