RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 ABCD1P33897 745 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 SERPINB4P48594 390 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 AP3M2P53677 418 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 TSHZ1Q6ZSZ6 1077 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 PYROXD2Q8N2H3 581 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 SLC25A41Q8N5S1 370 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 PLD5Q8N7P1 536 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 CMASQ8NFW8 434 aaPredicted RBP17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 RILPQ96NA2 401 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 CPSF2Q9P2I0 782 aaKnown RBP17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 METTL18O95568 372 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 ESRRAP11474 423 aaPredicted RBP17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 RPS12P25398 132 aaKnown RBP17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 GTF2A2P52657 109 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 ALDH18A1P54886 795 aaKnown RBP17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 YWHAZP63104 245 aaKnown RBP17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 OLIG2Q13516 323 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 CHI3L2Q15782 390 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 CELF3Q5SZQ8 465 aaKnown RBP17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 MRPL45Q9BRJ2 306 aaKnown RBP17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 RSAD1Q9HA92 442 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 CSADQ9Y600 493 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 ARID2Q68CP9 1835 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 DPPA5A6NC42 116 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 ABCG1P45844 678 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 PTDSS1P48651 473 aaKnown RBP17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 HACE1Q8IYU2 909 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 PCDH19Q8TAB3 1148 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 WDR60Q8WVS4 1066 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 PTPRHQ9HD43 1115 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 ZFATQ9P243 1243 aa17.7■□□□□ 0.42
SNRNP70-202ENST00000401730 B4GALT4O60513 344 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 DDNO94850 711 aaPredicted RBP17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 NPTXRO95502 500 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 LINGO3P0C6S8 592 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 TPBGLP0DKB5 382 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 CSH1P0DML2 217 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 CSH2P0DML3 217 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 CDH5P33151 784 aaPredicted RBP17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 SESN2P58004 480 aaPredicted RBP17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 RCN1Q15293 331 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 CCDC14Q49A88 953 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 CES4AQ5XG92 561 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 OR6B3Q8NGW1 331 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.69■□□□□ 0.427e-66■■■■□ 25.2
SNRNP70-202ENST00000401730 SHKBP1Q8TBC3 707 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 RNF157Q96PX1 679 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 SH3GL3Q99963 347 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 SNRNP25Q9BV90 132 aaKnown RBP17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 IFT122Q9HBG6 1241 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 MCM3APO60318 1980 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 CCDC78A2IDD5 438 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 SPDYE5A6NIY4 337 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 H3BRJ5 948 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 C2CD2LO14523 706 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 CALB2P22676 271 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 KCTD2Q14681 263 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 TMEM132DQ14C87 1099 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 KIZQ2M2Z5 673 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 NDUFAF2Q8N183 169 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 STK32AQ8WU08 396 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 FZD8Q9H461 694 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 DPEP3Q9H4B8 488 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 KLK14Q9P0G3 267 aa17.69■□□□□ 0.42
SNRNP70-202ENST00000401730 PHIPQ8WWQ0 1821 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 FCHO1O14526 889 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 PTPN4P29074 926 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 TUBP50607 506 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 ZNF143P52747 638 aaPredicted RBP17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 BST1Q10588 318 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 NOMO1Q15155 1222 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 CDCA2Q69YH5 1023 aaPredicted RBP17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 DENND5BQ6ZUT9 1274 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 ILDR2Q71H61 639 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 APOBEC3FQ8IUX4 373 aaKnown RBP17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 EGFL6Q8IUX8 553 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 TSC22D3Q99576 134 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 KCNK13Q9HB14 408 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 USP29Q9HBJ7 922 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 C2CD4BA6NLJ0 364 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 MEI4A8MW99 385 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 SOCS7O14512 581 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 LYPLA1O75608 230 aaPredicted RBP17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 CYP2C8P10632 490 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 SLC45A4Q5BKX6 768 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 ARMC3Q5W041 872 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 CYP4V2Q6ZWL3 525 aaPredicted RBP17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 RIOX2Q8IUF8 465 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 PPP1R14CQ8TAE6 165 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 AGR3Q8TD06 166 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 SLC44A1Q8WWI5 657 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 C18orf25Q96B23 403 aaPredicted RBP17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 CNPY3Q9BT09 278 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 C20orf27Q9GZN8 174 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 PIDD1Q9HB75 910 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 CYLDQ9NQC7 956 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 ETNK2Q9NVF9 386 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 DPP3Q9NY33 737 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 TEX264Q9Y6I9 313 aa17.68■□□□□ 0.42
SNRNP70-202ENST00000401730 POLR2AP24928 1970 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms