RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 RFX6Q8HWS3 928 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 FEZ2Q9UHY8 353 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-205ENST00000401607 COL4A4P53420 1690 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-205ENST00000401607 COL4A6Q14031 1691 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 NT5C1B-RDH14C9J2C7 533 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 RFC2P35250 354 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 PDK2Q15119 407 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 FUT10Q6P4F1 479 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 FAM71BQ8TC56 605 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 B3GALT6Q96L58 329 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 PCDH18Q9HCL0 1135 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 NAALADL1Q9UQQ1 740 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 SF3B1O75533 1304 aaKnown RBP eCLIP26.73■■□□□ 1.872e-6■■■■■ 85.9
CPNE1-205ENST00000401607 UPP2O95045 317 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 GAS8O95995 478 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 IL4RP24394 825 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 CYP2F1P24903 491 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 ITGB8P26012 769 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 BYSLQ13895 437 aaKnown RBP26.73■■□□□ 1.87
CPNE1-205ENST00000401607 KRT81Q14533 505 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 ERMARDQ5T6L9 678 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 PM20D1Q6GTS8 502 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 CEP57Q86XR8 500 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 DCP1BQ8IZD4 617 aaKnown RBP26.73■■□□□ 1.87
CPNE1-205ENST00000401607 MREGQ8N565 214 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 CCDC185Q8N715 623 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 SLC35B2Q8TB61 432 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 BCL7CQ8WUZ0 217 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-205ENST00000401607 SAE1Q9UBE0 346 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-205ENST00000401607 STAP1Q9ULZ2 295 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 USP3Q9Y6I4 520 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 LTBP2Q14767 1821 aa26.73■■□□□ 1.87
CPNE1-205ENST00000401607 OASLQ15646 514 aaKnown RBP26.72■■□□□ 1.87
CPNE1-205ENST00000401607 SCML4Q8N228 414 aa26.72■■□□□ 1.87
CPNE1-205ENST00000401607 ACTL9Q8TC94 416 aa26.72■■□□□ 1.87
CPNE1-205ENST00000401607 NKD2Q969F2 451 aaPredicted RBP26.72■■□□□ 1.87
CPNE1-205ENST00000401607 RRP9O43818 475 aaKnown RBP26.71■■□□□ 1.87
CPNE1-205ENST00000401607 LTFP02788 710 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 VCPP55072 806 aaKnown RBP26.71■■□□□ 1.87
CPNE1-205ENST00000401607 OTUD4Q01804 1114 aaKnown RBP26.71■■□□□ 1.87
CPNE1-205ENST00000401607 CTXN3Q4LDR2 81 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 MAP7D3Q8IWC1 876 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 IRGQQ8WZA9 623 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 RNF157Q96PX1 679 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 DRG1Q9Y295 367 aaKnown RBP26.71■■□□□ 1.87
CPNE1-205ENST00000401607 TRIM43BA6NCK2 446 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 DGKIO75912 1065 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 IVDP26440 423 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 DPYSL2Q16555 572 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 ZNF280DQ6N043 979 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 FAM131BQ86XD5 332 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 VSIG1Q86XK7 387 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 KRT222Q8N1A0 295 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 TTC13Q8NBP0 860 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 TRIM43Q96BQ3 446 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-205ENST00000401607 MAGEB5Q9BZ81 275 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 ABI2Q9NYB9 513 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-205ENST00000401607 AP4E1Q9UPM8 1137 aa26.71■■□□□ 1.87
CPNE1-205ENST00000401607 M0QYT0 321 aa26.7■■□□□ 1.86
CPNE1-205ENST00000401607 TNFRSF10BO14763 440 aa26.7■■□□□ 1.86
CPNE1-205ENST00000401607 PECAM1P16284 738 aaPredicted RBP26.7■■□□□ 1.86
CPNE1-205ENST00000401607 L1CAMP32004 1257 aa26.7■■□□□ 1.86
CPNE1-205ENST00000401607 GBP1P32455 592 aa26.7■■□□□ 1.86
CPNE1-205ENST00000401607 RDXP35241 583 aaKnown RBP26.7■■□□□ 1.86
CPNE1-205ENST00000401607 HSPA9P38646 679 aaKnown RBP26.7■■□□□ 1.86
CPNE1-205ENST00000401607 PLTPP55058 493 aa26.7■■□□□ 1.86
CPNE1-205ENST00000401607 TRIP13Q15645 432 aaPredicted RBP26.7■■□□□ 1.86
CPNE1-205ENST00000401607 NFE2Q16621 373 aaPredicted RBP26.7■■□□□ 1.86
CPNE1-205ENST00000401607 FBXO25Q8TCJ0 367 aa26.7■■□□□ 1.86
CPNE1-205ENST00000401607 FAF2Q96CS3 445 aa26.7■■□□□ 1.86
CPNE1-205ENST00000401607 ZNF670Q9BS34 389 aa26.7■■□□□ 1.86
CPNE1-205ENST00000401607 FRMD8P1Q9BZ68 369 aaPredicted RBP26.7■■□□□ 1.86
CPNE1-205ENST00000401607 MTMR10Q9NXD2 777 aa26.7■■□□□ 1.86
CPNE1-205ENST00000401607 ASIC3Q9UHC3 531 aa26.7■■□□□ 1.86
CPNE1-205ENST00000401607 APOC4-APOC2K7ER74 178 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 CAPN9O14815 690 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 APOC2P02655 101 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 GRIK1P39086 918 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 ELAVL2Q12926 359 aaKnown RBP26.69■■□□□ 1.86
CPNE1-205ENST00000401607 ALLCQ8N6M5 410 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 SCAMP5Q8TAC9 235 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 ZBTB9Q96C00 473 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 FUBP3Q96I24 572 aaKnown RBP eCLIP26.69■■□□□ 1.86
CPNE1-205ENST00000401607 FMO2Q99518 471 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 CWH43Q9H720 699 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 FZD10Q9ULW2 581 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 ZNF148Q9UQR1 794 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 OR6C75A6NL08 312 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 ZNF487B1APH4 448 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 TP73O15350 636 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 TIMP1P01033 207 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 KLRC2P26717 231 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 SLC5A3P53794 718 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 LMNB2Q03252 620 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 TFDP2Q14188 446 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 ANKRD20A8PQ5CZ79 823 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 RTP2Q5QGT7 225 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 PQLC3Q8N755 202 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 ART4Q93070 314 aa26.69■■□□□ 1.86
CPNE1-205ENST00000401607 MAK16Q9BXY0 300 aaKnown RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms