RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SEPHS2Q99611 448 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.18□□□□□ -0.14
VAPA-202ENST00000400000 UBQLN1Q9UMX0 589 aaKnown RBP14.18□□□□□ -0.14
VAPA-202ENST00000400000 SMG5Q9UPR3 1016 aaKnown RBP14.18□□□□□ -0.14
VAPA-202ENST00000400000 VCLP18206 1134 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 ADIGQ0VDE8 80 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 CBWD3Q5JTY5 395 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 CBWD5Q5RIA9 395 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 TTC33Q6PID6 262 aaPredicted RBP14.17□□□□□ -0.14
VAPA-202ENST00000400000 MMGT1Q8N4V1 131 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 RELTQ969Z4 430 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 USP18Q9UMW8 372 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 SNX13Q9Y5W8 968 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 QRICH2Q9H0J4 1663 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 A0A1B0GTH6 734 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 SYDE1Q6ZW31 735 aaPredicted RBP14.17□□□□□ -0.14
VAPA-202ENST00000400000 BTN2A1Q7KYR7 527 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 RNF44Q7L0R7 432 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 CMTM5Q96DZ9 223 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 MKNK1Q9BUB5 465 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 CCSER1Q9C0I3 900 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 EXO5Q9H790 373 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 TLR8Q9NR97 1041 aaKnown RBP14.17□□□□□ -0.14
VAPA-202ENST00000400000 PDS5AQ29RF7 1337 aaKnown RBP14.17□□□□□ -0.14
VAPA-202ENST00000400000 CHURC1-FNTBB4DL54 471 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 AP3B1O00203 1094 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 ANXA9O76027 345 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 EIF2S1P05198 315 aaKnown RBP14.17□□□□□ -0.14
VAPA-202ENST00000400000 ICAM1P05362 532 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 NOS3P29474 1203 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 GRK3P35626 688 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 NPTX2P47972 431 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 GEMP55040 296 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 TTLL9Q3SXZ7 439 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 CSGALNACT1Q8TDX6 532 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 FIG4Q92562 907 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 CERS4Q9HA82 394 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 OR8H2Q8N162 312 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 UTP15Q8TED0 518 aaKnown RBP14.17□□□□□ -0.14
VAPA-202ENST00000400000 ARHGEF3Q9NR81 526 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 TRIM66O15016 1216 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 BACE1P56817 501 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 MPZL3Q6UWV2 235 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 NOA1Q8NC60 698 aaKnown RBP14.17□□□□□ -0.14
VAPA-202ENST00000400000 KRT35Q92764 455 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 COL26A1Q96A83 441 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 GRAMD1AQ96CP6 724 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 XPO6Q96QU8 1125 aaKnown RBP14.17□□□□□ -0.14
VAPA-202ENST00000400000 HEY2Q9UBP5 337 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 SOX13Q9UN79 622 aa14.17□□□□□ -0.14
VAPA-202ENST00000400000 DDTLA6NHG4 134 aaPredicted RBP14.16□□□□□ -0.14
VAPA-202ENST00000400000 DEAF1O75398 565 aaPredicted RBP14.16□□□□□ -0.14
VAPA-202ENST00000400000 UMPSP11172 480 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 ORC2Q13416 577 aaPredicted RBP14.16□□□□□ -0.14
VAPA-202ENST00000400000 TRPM8Q7Z2W7 1104 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 CASKIN2Q8WXE0 1202 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 OLFM3Q96PB7 478 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 OSGEPQ9NPF4 335 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 OLFML3Q9NRN5 406 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 KLHL18O94889 574 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 SPATA31D3P0C874 917 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 LAMTOR4Q0VGL1 99 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 DGKKQ5KSL6 1271 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 SPATA31D4Q6ZUB0 917 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 SYTL1Q8IYJ3 562 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 TATDN2Q93075 761 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 ABCG8Q9H221 673 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 ZDHHC6Q9H6R6 413 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 KLHL1Q9NR64 748 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 LNPEPQ9UIQ6 1025 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 DYRK3O43781 588 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 CDH16O75309 829 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 PLK1P53350 603 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 CCDC15Q0P6D6 951 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 PXMP2Q9NR77 195 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 AP4E1Q9UPM8 1137 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 DGKZQ13574 1117 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 NDEL1Q9GZM8 345 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 PRKAB1Q9Y478 270 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 GLI2P10070 1586 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 ZCCHC18P0CG32 403 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 RPA1P27694 616 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 OR1E1P30953 314 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 ABCG1P45844 678 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 RPL10AP62906 217 aaKnown RBP14.16□□□□□ -0.14
VAPA-202ENST00000400000 SLC39A12Q504Y0 691 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 MRNIPQ6NTE8 343 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 SCUBE3Q8IX30 993 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 COLGALT1Q8NBJ5 622 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 TPCN2Q8NHX9 752 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 XPNPEP3Q9NQH7 507 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 SHOC2Q9UQ13 582 aa14.16□□□□□ -0.14
VAPA-202ENST00000400000 C16orf96A6NNT2 1141 aa14.15□□□□□ -0.14
VAPA-202ENST00000400000 FAM86B1E9PN63 330 aa14.15□□□□□ -0.14
VAPA-202ENST00000400000 IFRD1O00458 451 aaPredicted RBP14.15□□□□□ -0.14
VAPA-202ENST00000400000 PPP1R37O75864 691 aa14.15□□□□□ -0.14
VAPA-202ENST00000400000 SUPT20HL2P0C7V6 817 aa14.15□□□□□ -0.14
VAPA-202ENST00000400000 GRK2P25098 689 aa14.15□□□□□ -0.14
VAPA-202ENST00000400000 RRM2P31350 389 aa14.15□□□□□ -0.14
VAPA-202ENST00000400000 PDIA6Q15084 440 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms