RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 NCAPD2Q15021 1401 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 K7ERI5 159 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 PGS1Q32NB8 556 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 RFX4Q33E94 735 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 PMF1Q6P1K2 205 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 C2orf40Q9H1Z8 148 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 VPS45Q9NRW7 570 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 NDUFB9Q9Y6M9 179 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 APBA3O96018 575 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 ANXA6P08133 673 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 UCHL3P15374 230 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 ADORA2BP29275 332 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 PBLDP30039 288 aaPredicted RBP8.62□□□□□ -1.03
CHD8-201ENST00000399982 HIST2H2ACQ16777 129 aaPredicted RBP8.62□□□□□ -1.03
CHD8-201ENST00000399982 IL31Q6EBC2 164 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 HIST2H2AA3Q6FI13 130 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 MTDHQ86UE4 582 aaKnown RBP8.62□□□□□ -1.03
CHD8-201ENST00000399982 OR7A2PQ8NGA2 310 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 CAPSLQ8WWF8 208 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 HPS1Q92902 700 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 TRIM9Q9C026 710 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 RSPH9Q9H1X1 276 aaPredicted RBP8.62□□□□□ -1.03
CHD8-201ENST00000399982 GOLPH3Q9H4A6 298 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 SENP2Q9HC62 589 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 PADI4Q9UM07 663 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 MAPRE3Q9UPY8 281 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 RPL26P61254 145 aaKnown RBP8.62□□□□□ -1.03
CHD8-201ENST00000399982 ENPEPQ07075 957 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 TWF1Q12792 350 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 CYP4Z2PQ8N1L4 340 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 OR6Y1Q8NGX8 325 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 DCAF4Q8WV16 495 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 WNK4Q96J92 1243 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 CHP1Q99653 195 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 TMEM120AQ9BXJ8 343 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 DDX18Q9NVP1 670 aaKnown RBP8.62□□□□□ -1.03
CHD8-201ENST00000399982 SLC39A10Q9ULF5 831 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 SLC9A8Q9Y2E8 581 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 TRIM49BA6NDI0 452 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 GNB5O14775 395 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 KPNA5O15131 536 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 LDLRP01130 860 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 FGRP09769 529 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 TNNI3P19429 210 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 GP5P40197 560 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 CBX3Q13185 183 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 AGAP9Q5VTM2 703 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 CACHD1Q5VU97 1274 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 C11orf63Q6NUN7 778 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 TPCN2Q8NHX9 752 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 SDR42E1Q8WUS8 393 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 DNAJC1Q96KC8 554 aaKnown RBP8.62□□□□□ -1.03
CHD8-201ENST00000399982 ZSWIM1Q9BR11 485 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 C11orf70Q9BRQ4 267 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 SLITRK2Q9H156 845 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 ZSWIM5Q9P217 1185 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 SLC26A11Q86WA9 606 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 SLC22A9Q8IVM8 553 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 SYTL1Q8IYJ3 562 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 SPIRE2Q8WWL2 714 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 PACSIN1Q9BY11 444 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 PCMTD2Q9NV79 361 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 FAM25EA8MYX2 175 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 GZMAP12544 262 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 HSD17B4P51659 736 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 PLCL1Q15111 1095 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 LAYNQ6UX15 382 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 CYP4Z1Q86W10 505 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 EGFL6Q8IUX8 553 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 MB21D2Q8IYB1 491 aaPredicted RBP8.62□□□□□ -1.03
CHD8-201ENST00000399982 EID3Q8N140 333 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 TASP1Q9H6P5 420 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 AXIN1O15169 862 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 KHDRBS3O75525 346 aaKnown RBP8.62□□□□□ -1.03
CHD8-201ENST00000399982 CLTBP09497 229 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 PDGFRBP09619 1106 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 DSG3P32926 999 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 PTENP60484 403 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 PDK1Q15118 436 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 TRIM65Q6PJ69 517 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 ABRAXAS1Q6UWZ7 409 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 THNSL1Q8IYQ7 743 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 CENPLQ8N0S6 344 aaPredicted RBP8.62□□□□□ -1.03
CHD8-201ENST00000399982 OXNAD1Q96HP4 312 aaPredicted RBP8.62□□□□□ -1.03
CHD8-201ENST00000399982 GDF3Q9NR23 364 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 PRELID1Q9Y255 219 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 SNX8Q9Y5X2 465 aa8.62□□□□□ -1.03
CHD8-201ENST00000399982 EXTL3O43909 919 aa8.61□□□□□ -1.03
CHD8-201ENST00000399982 SMNDC1O75940 238 aaKnown RBP eCLIP8.61□□□□□ -1.032e-27■■■■■ 27.9
CHD8-201ENST00000399982 OR6A2O95222 327 aa8.61□□□□□ -1.03
CHD8-201ENST00000399982 HSD3B1P14060 373 aa8.61□□□□□ -1.03
CHD8-201ENST00000399982 PTDSS1P48651 473 aaKnown RBP8.61□□□□□ -1.03
CHD8-201ENST00000399982 CDK16Q00536 496 aa8.61□□□□□ -1.03
CHD8-201ENST00000399982 PRKAA1Q13131 559 aa8.61□□□□□ -1.03
CHD8-201ENST00000399982 MYBPC2Q14324 1141 aa8.61□□□□□ -1.03
CHD8-201ENST00000399982 LACTB2Q53H82 288 aaPredicted RBP8.61□□□□□ -1.03
CHD8-201ENST00000399982 RTKN2Q8IZC4 609 aa8.61□□□□□ -1.03
CHD8-201ENST00000399982 PNPT1Q8TCS8 783 aaKnown RBP8.61□□□□□ -1.03
CHD8-201ENST00000399982 SYTL5Q8TDW5 730 aaPredicted RBP8.61□□□□□ -1.03
CHD8-201ENST00000399982 NFKBIZQ9BYH8 718 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms