RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 TNNI1P19237 187 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 QARSP47897 775 aaKnown RBP17.71■□□□□ 0.43
PTPRA-205ENST00000399903 OTUD4Q01804 1114 aaKnown RBP17.71■□□□□ 0.43
PTPRA-205ENST00000399903 HSF5Q4G112 596 aaPredicted RBP17.71■□□□□ 0.43
PTPRA-205ENST00000399903 ATG16L1Q676U5 607 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 ANO5Q75V66 913 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 EEPD1Q7L9B9 569 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 TMC7Q7Z402 723 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 LRRN4Q8WUT4 740 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 CPT1BQ92523 772 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 SLITRK1Q96PX8 696 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 CAPN14A8MX76 684 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 FOXD2O60548 495 aaPredicted RBP17.71■□□□□ 0.43
PTPRA-205ENST00000399903 TMEM63AO94886 807 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 TFPTP0C1Z6 253 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 SERPINB8P50452 374 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 MAMLD1Q13495 774 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 C6orf52Q5T4I8 152 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 AMIGO2Q86SJ2 522 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 KATNAL2Q8IYT4 538 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 TRIM56Q9BRZ2 755 aaKnown RBP17.71■□□□□ 0.43
PTPRA-205ENST00000399903 SHOC2Q9UQ13 582 aa17.71■□□□□ 0.43
PTPRA-205ENST00000399903 TCRBV9S1A1TA0A576 114 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 OATP04181 439 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 PSMD7P51665 324 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 CCNIQ14094 377 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 C16orf46Q6P387 395 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 SPOCD1Q6ZMY3 1216 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 PPIL6Q8IXY8 311 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 C20orf27Q9GZN8 174 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 CST8O60676 142 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 STIP1P31948 543 aaKnown RBP17.7■□□□□ 0.42
PTPRA-205ENST00000399903 ALDH1A3P47895 512 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 COPAP53621 1224 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 SFSWAPQ12872 951 aaKnown RBP17.7■□□□□ 0.42
PTPRA-205ENST00000399903 KRT81Q14533 505 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 C16orf72Q14CZ0 275 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 MAP3K21Q5TCX8 1036 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 VWA5B1Q5TIE3 1220 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 B3GNT9Q6UX72 402 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 TRIML2Q8N7C3 387 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 FAM81BQ96LP2 452 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 CCDC28BQ9BUN5 200 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 MRPL47Q9HD33 250 aaKnown RBP17.7■□□□□ 0.42
PTPRA-205ENST00000399903 PFDN4Q9NQP4 134 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 XPNPEP1Q9NQW7 623 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 PXMP2Q9NR77 195 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 KIF13BQ9NQT8 1826 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 UGT1A9O60656 530 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 TGDSO95455 350 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 FDFT1P37268 417 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 BACE1P56817 501 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 UGT2A3Q6UWM9 527 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 MCF2L2Q86YR7 1114 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 LRGUKQ96M69 825 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 PRICKLE1Q96MT3 831 aaPredicted RBP17.7■□□□□ 0.42
PTPRA-205ENST00000399903 RIT2Q99578 217 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 FAM213AQ9BRX8 229 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 UGT1A7Q9HAW7 530 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 UGT1A10Q9HAW8 530 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 UGT1A8Q9HAW9 530 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 UBAP1Q9NZ09 502 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 GABBR1Q9UBS5 961 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 APOBEC2Q9Y235 224 aaKnown RBP17.7■□□□□ 0.42
PTPRA-205ENST00000399903 DNAJC16Q9Y2G8 782 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 MAD1L1Q9Y6D9 718 aa17.7■□□□□ 0.42
PTPRA-205ENST00000399903 UNGP13051 313 aaPredicted RBP17.69■□□□□ 0.42
PTPRA-205ENST00000399903 PTPRAP18433 802 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 STX3Q13277 289 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 BRDTQ58F21 947 aaPredicted RBP17.69■□□□□ 0.42
PTPRA-205ENST00000399903 KLHL35Q6PF15 583 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 NDUFAF2Q8N183 169 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 GPAMQ9HCL2 828 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 PCSK1NQ9UHG2 260 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 UBIAD1Q9Y5Z9 338 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 A0A1B0GTW7 788 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 RPL22P35268 128 aaKnown RBP17.69■□□□□ 0.42
PTPRA-205ENST00000399903 MRPS22P82650 360 aaKnown RBP17.69■□□□□ 0.42
PTPRA-205ENST00000399903 WDR44Q5JSH3 913 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 SWSAP1Q6NVH7 229 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 RCOR2Q8IZ40 523 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 ARL10Q8N8L6 244 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 ZNF280CQ8ND82 737 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 LPAR1Q92633 364 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 DCUN1D1Q96GG9 259 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 WDR83Q9BRX9 315 aaKnown RBP17.69■□□□□ 0.42
PTPRA-205ENST00000399903 DCUN1D5Q9BTE7 237 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 NDUFA13Q9P0J0 144 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 ZNF180Q9UJW8 692 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 COL2A1P02458 1487 aaPredicted RBP17.69■□□□□ 0.42
PTPRA-205ENST00000399903 F5H423 210 aaPredicted RBP17.69■□□□□ 0.42
PTPRA-205ENST00000399903 P4HA2O15460 535 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 NR3C2P08235 984 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 ETV4P43268 484 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 TGFB2P61812 414 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 CES4AQ5XG92 561 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 R3HDMLQ9H3Y0 253 aa17.69■□□□□ 0.42
PTPRA-205ENST00000399903 MYPNQ86TC9 1320 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 DGKIO75912 1065 aa17.68■□□□□ 0.42
PTPRA-205ENST00000399903 SMIM18P0DKX4 95 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms