RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 AARDQ4LEZ3 155 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 SFMBT2Q5VUG0 894 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 AADACL4Q5VUY2 407 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 USP45Q70EL2 814 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 DGLUCYQ7Z3D6 616 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZNF227Q86WZ6 799 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 MIER2Q8N344 545 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 TRIML2Q8N7C3 387 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 GOLGA6L1Q8N7Z2 621 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 AGR3Q8TD06 166 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 AUTS2Q8WXX7 1259 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 SLC5A5Q92911 643 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 CNOT6LQ96LI5 555 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 TCF12Q99081 682 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 PHACTR1Q9C0D0 580 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZC3H12CQ9C0D7 883 aaKnown RBP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 CEP44Q9C0F1 390 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 NDST4Q9H3R1 872 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 MLXIPQ9HAP2 919 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 CYP4F12Q9HCS2 524 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 NMRK1Q9NWW6 199 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 NINJ2Q9NZG7 142 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 OGFRQ9NZT2 677 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 SALL4Q9UJQ4 1053 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 FEM1BQ9UK73 627 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 ASB3Q9Y575 518 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 MAGEB3O15480 346 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 PROM1O43490 865 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 STX10O60499 249 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 OLFM2O95897 454 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 CHMP24386 653 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 CA8P35219 290 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 MLH1P40692 756 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 PLS1Q14651 629 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 CALCRLQ16602 461 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZNF658Q5TYW1 1059 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 MAEAQ7L5Y9 396 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 KSR1Q8IVT5 923 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 TTC39CQ8N584 583 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 KIAA0895Q8NCT3 520 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 OR56B2PQ8NGI1 322 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 RFWD2Q8NHY2 731 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 RIN2Q8WYP3 895 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 ELMO3Q96BJ8 720 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 TUBGCP2Q9BSJ2 902 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 H2AFY2Q9P0M6 372 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 LRWD1Q9UFC0 647 aa6.52□□□□□ -1.37
TRAPPC13-202ENST00000399438 MYH6P13533 1939 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 CHD4Q14839 1912 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 FAM86C2PA6NEL3 165 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 DDTLA6NHG4 134 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 F8W8V4 182 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 BUB1O43683 1085 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 CRTAMO95727 393 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 NPPAP01160 153 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 LRG1P02750 347 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 ATP1A1P05023 1023 aaKnown RBP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 VAV1P15498 845 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 CALML3P27482 149 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 JAG1P78504 1218 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 ALDH6A1Q02252 535 aaKnown RBP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 C19orf57Q0VDD7 668 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 BNIP1Q12981 228 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 SNX17Q15036 470 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 FAM26FQ5R3K3 315 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 BROXQ5VW32 411 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 NEK8Q86SG6 692 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 KIAA1328Q86T90 577 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 SULF2Q8IWU5 870 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 THNSL1Q8IYQ7 743 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 ADGRF4Q8IZF3 695 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 ADSSL1Q8N142 457 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 CASP10Q92851 521 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 VWCEQ96DN2 955 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 STK33Q9BYT3 514 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 TRIM9Q9C026 710 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZMAT3Q9HA38 289 aaKnown RBP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 SSX2IPQ9Y2D8 614 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 STXBP5LQ9Y2K9 1186 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 ARAP2Q8WZ64 1704 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 IRS2Q9Y4H2 1338 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 H0YAE9 185 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 H0YHG0 523 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 AP3D1O14617 1153 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 EDIL3O43854 480 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 MGEA5O60502 916 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 DAB1O75553 588 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 IFNB1P01574 187 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 TPM1P09493 284 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 CSH1P0DML2 217 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 CSH2P0DML3 217 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 S100A5P33763 92 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 EFR3AQ14156 821 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 SBK1Q52WX2 424 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZNF574Q6ZN55 896 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 ARMC9Q7Z3E5 817 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 SZRD1Q7Z422 152 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 C2CD5Q86YS7 1000 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms