RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 HIF1AQ16665 826 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 FNBP1LQ5T0N5 605 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 C1QTNF12Q5T7M4 302 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 WLSQ5T9L3 541 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 SMYD5Q6GMV2 418 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 OSTM1Q86WC4 334 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 ANKRD52Q8NB46 1076 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 ZNF784Q8NCA9 323 aaPredicted RBP12.26□□□□□ -0.45
COL25A1-202ENST00000399127 LPPQ93052 612 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 ZNF560Q96MR9 790 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 FAM124BQ9H5Z6 455 aaPredicted RBP12.26□□□□□ -0.45
COL25A1-202ENST00000399127 SHOC2Q9UQ13 582 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 FARP1Q9Y4F1 1045 aaPredicted RBP12.26□□□□□ -0.45
COL25A1-202ENST00000399127 H7C0C1 242 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 TMEM63AO94886 807 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 KCNE1P15382 129 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 ATP5OP48047 213 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 RPS6KA3P51812 740 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 ROR1Q01973 937 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 IFT88Q13099 833 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 MPP2Q14168 576 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 VSTM1Q6UX27 236 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 CENPUQ71F23 418 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 CHMP6Q96FZ7 201 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 RNF157Q96PX1 679 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 OSBPL7Q9BZF2 842 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 KIF9Q9HAQ2 790 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 PRDM16Q9HAZ2 1276 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 CDY2AQ9Y6F7 541 aa12.26□□□□□ -0.45
COL25A1-202ENST00000399127 PDCD11Q14690 1871 aaKnown RBP12.25□□□□□ -0.45
COL25A1-202ENST00000399127 SYNJ2BP-COX16A0A087WUM0 186 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 SEPT4O43236 478 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 CDH16O75309 829 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 ENDOD1O94919 500 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 GNAT1P11488 350 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 BRAFP15056 766 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 MLH1P40692 756 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 BCAT1P54687 386 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 STAT4Q14765 748 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 ANKRD20A8PQ5CZ79 823 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 ARHGAP17Q68EM7 881 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 RELL1Q8IUW5 271 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 PPIL6Q8IXY8 311 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 REM2Q8IYK8 340 aaPredicted RBP12.25□□□□□ -0.45
COL25A1-202ENST00000399127 PQLC3Q8N755 202 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 PLD5Q8N7P1 536 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 PCDH19Q8TAB3 1148 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 GDAP1Q8TB36 358 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 RAET1EQ8TD07 263 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 DYDC1Q8WWB3 177 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 CCDC77Q9BR77 488 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 MTG1Q9BT17 334 aaPredicted RBP12.25□□□□□ -0.45
COL25A1-202ENST00000399127 PCDH18Q9HCL0 1135 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 XPNPEP3Q9NQH7 507 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 GDAP2Q9NXN4 497 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 COX16Q9P0S2 106 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 TIMM13Q9Y5L4 95 aaPredicted RBP12.25□□□□□ -0.45
COL25A1-202ENST00000399127 XPOTO43592 962 aaKnown RBP12.25□□□□□ -0.45
COL25A1-202ENST00000399127 BEST1O76090 585 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 SNUPNO95149 360 aaKnown RBP12.25□□□□□ -0.45
COL25A1-202ENST00000399127 SETSIPP0DME0 302 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 DRD4P21917 467 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 GCAP28676 217 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 SSTR1P30872 391 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 GJA9P57773 515 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 NOMO1Q15155 1222 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 RBBP5Q15291 538 aaKnown RBP12.25□□□□□ -0.45
COL25A1-202ENST00000399127 SV2CQ496J9 727 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 XKR4Q5GH76 650 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 RNF187Q5TA31 235 aaPredicted RBP12.25□□□□□ -0.45
COL25A1-202ENST00000399127 ARMC3Q5W041 872 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 WSCD1Q658N2 575 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 GDF6Q6KF10 455 aaPredicted RBP12.25□□□□□ -0.45
COL25A1-202ENST00000399127 MAP7D3Q8IWC1 876 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 LRRC34Q8IZ02 419 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 CRYBG2Q8N1P7 616 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 NAT8LQ8N9F0 302 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 KLHL23Q8NBE8 558 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 FAM149B1Q96BN6 582 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 CENPTQ96BT3 561 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 GAD1Q99259 594 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 FOXP3Q9BZS1 431 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 DHX35Q9H5Z1 703 aaKnown RBP12.25□□□□□ -0.45
COL25A1-202ENST00000399127 XPO7Q9UIA9 1087 aaKnown RBP12.25□□□□□ -0.45
COL25A1-202ENST00000399127 ST3GAL5Q9UNP4 418 aa12.25□□□□□ -0.45
COL25A1-202ENST00000399127 SRRM3A6NNA2 597 aaPredicted RBP12.24□□□□□ -0.45
COL25A1-202ENST00000399127 CYB561D2O14569 222 aa12.24□□□□□ -0.45
COL25A1-202ENST00000399127 VIMP08670 466 aaKnown RBP12.24□□□□□ -0.45
COL25A1-202ENST00000399127 HOXD10P28358 340 aa12.24□□□□□ -0.45
COL25A1-202ENST00000399127 PNPLA4P41247 253 aa12.24□□□□□ -0.45
COL25A1-202ENST00000399127 BCAR1P56945 870 aa12.24□□□□□ -0.45
COL25A1-202ENST00000399127 MRPS6P82932 125 aaKnown RBP12.24□□□□□ -0.45
COL25A1-202ENST00000399127 ADIGQ0VDE8 80 aa12.24□□□□□ -0.45
COL25A1-202ENST00000399127 TFDP2Q14188 446 aa12.24□□□□□ -0.45
COL25A1-202ENST00000399127 EFTUD2Q15029 972 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL25A1-202ENST00000399127 BBS9Q3SYG4 887 aa12.24□□□□□ -0.45
COL25A1-202ENST00000399127 BOLA3Q53S33 107 aa12.24□□□□□ -0.45
COL25A1-202ENST00000399127 FAXCQ5TGI0 409 aa12.24□□□□□ -0.45
COL25A1-202ENST00000399127 CCDC185Q8N715 623 aa12.24□□□□□ -0.45
COL25A1-202ENST00000399127 RNF169Q8NCN4 708 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms