RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 LHX1P48742 406 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ZNF157P51786 506 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GPX6P59796 221 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 BASP1P80723 227 aaKnown RBP18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 MMRN1Q13201 1228 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SPARCL1Q14515 664 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 HIC1Q14526 733 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SLC25A52Q3SY17 297 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TWF2Q6IBS0 349 aaKnown RBP18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 MICALL1Q8N3F8 863 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 B3GALNT2Q8NCR0 500 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 PCDH19Q8TAB3 1148 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 PIWIL1Q96J94 861 aaKnown RBP18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 PPP1R10Q96QC0 940 aaKnown RBP18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CXCL16Q9H2A7 254 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TRABDQ9H4I3 376 aa18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 USP15Q9Y4E8 981 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-204ENST00000399084 POC1B-GALNT4F8VUJ3 575 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GCATO75600 419 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GRAP2O75791 330 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 FBXO21O94952 628 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ZWINTO95229 277 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 IFNAR2P48551 515 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GJA9P57773 515 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 MRPS6P82932 125 aaKnown RBP18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 FASTKD3Q14CZ7 662 aaKnown RBP18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 IFNL1Q8IU54 200 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 DENND1AQ8TEH3 1009 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SLC9A7Q96T83 725 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 APOL6Q9BWW8 343 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SPC25Q9HBM1 224 aa18.42■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CLUHO75153 1309 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SF3B1O75533 1304 aaKnown RBP eCLIP18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SPTLC1O15269 473 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 FAM155BO75949 473 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 PDGFRBP09619 1106 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 FGFR1P11362 822 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CYP2B6P20813 491 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RPL9P32969 192 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 NOS2P35228 1153 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 MSH2P43246 934 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CDK16Q00536 496 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TTC31Q49AM3 519 aaPredicted RBP18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 FNBP1LQ5T0N5 605 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ANKRD22Q5VYY1 191 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ZC3H18Q86VM9 953 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 FBXO36Q8NEA4 188 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SLC2A14Q8TDB8 520 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 NT5C3BQ969T7 300 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ELAC2Q9BQ52 826 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 DPEP3Q9H4B8 488 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RRN3Q9NYV6 651 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 STAP1Q9ULZ2 295 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TRPV2Q9Y5S1 764 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TEX264Q9Y6I9 313 aa18.41■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TCP11X1B4DZS4 312 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TNPO2O14787 897 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 DAB1O75553 588 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 OAS1P00973 400 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 PTPN1P18031 435 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CYP2F1P24903 491 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 LMO2P25791 158 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ARL4AP40617 200 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 LIG3P49916 1009 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ZNF135P52742 658 aaPredicted RBP18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 YWHAZP63104 245 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 MPP2Q14168 576 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SLC45A4Q5BKX6 768 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ANKRD42Q8N9B4 389 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 OSBPL7Q9BZF2 842 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 AP4E1Q9UPM8 1137 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 GIT1Q9Y2X7 761 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 IQANK1A0A1B0GTG1 560 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 PIK3R2O00459 728 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CYB561D2O14569 222 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TM9SF1O15321 606 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 KCNN4O15554 427 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TMEM63AO94886 807 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ASMTLO95671 621 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CCDC130P13994 396 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CREB1P16220 341 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 NPR3P17342 541 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TPSB2P20231 275 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 ADORA2BP29275 332 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 SARNPP82979 210 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TPSAB1Q15661 275 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CCL14Q16627 93 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 BBS9Q3SYG4 887 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 LGSNQ5TDP6 509 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 NUGGCQ68CJ6 796 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RGMBQ6NW40 437 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 C1orf228Q6PIY5 440 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 CYS1Q717R9 158 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 FAM228AQ86W67 206 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TGS1Q96RS0 853 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 B3GNT5Q9BYG0 378 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 UPF3AQ9H1J1 476 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 TSPYL2Q9H2G4 693 aaPredicted RBP18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RNF39Q9H2S5 420 aa18.4■□□□□ 0.54
HLA-DQB1-204ENST00000399084 RAB6BQ9NRW1 208 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms