RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.14□□□□□ -0.15
VCX3A-202ENST00000398729 WDR5BQ86VZ2 330 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 RPLP0P6Q8NHW5 317 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 SLC35C1Q96A29 364 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 ACDQ96AP0 544 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 ARID3AQ99856 593 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 CYLDQ9NQC7 956 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 ANGPTL2Q9UKU9 493 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 SPAG17Q6Q759 2223 aa14.14□□□□□ -0.15
VCX3A-202ENST00000398729 AKAP13Q12802 2813 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 CCDC163A0A0D9SF12 145 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 IRF1P10914 325 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 ADH5P11766 374 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 ATP5C1P36542 298 aaKnown RBP14.13□□□□□ -0.15
VCX3A-202ENST00000398729 EIF2DP41214 584 aaKnown RBP14.13□□□□□ -0.15
VCX3A-202ENST00000398729 PGFP49763 221 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 PSEN1P49768 467 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 KIF11P52732 1056 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 LIMK1P53667 647 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 RAD23BP54727 409 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 SLC8A3P57103 927 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 GOLGA8FQ08AF8 430 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 GOLGA8DPQ0D2H9 430 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 CUL2Q13617 745 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 CCDC6Q16204 474 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 ARHGAP17Q68EM7 881 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 RHBDF2Q6PJF5 856 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 FOXR2Q6PJQ5 311 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 SYT13Q7L8C5 426 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 CAMKK1Q8N5S9 505 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 SLC4A11Q8NBS3 891 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 NELFBQ8WX92 580 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 EZH1Q92800 747 aaPredicted RBP14.13□□□□□ -0.15
VCX3A-202ENST00000398729 DUSP9Q99956 384 aaKnown RBP14.13□□□□□ -0.15
VCX3A-202ENST00000398729 ARRDC1-AS1Q9H2J1 176 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 DSPP15924 2871 aaKnown RBP14.13□□□□□ -0.15
VCX3A-202ENST00000398729 WDFY3Q8IZQ1 3526 aa14.13□□□□□ -0.15
VCX3A-202ENST00000398729 A0A1W2PQH9 124 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 PPP1R3GB7ZBB8 358 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 BIN1O00499 593 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 TBX18O95935 607 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 ZNF806P0C7X5 589 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 BMP6P22004 513 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 TBXAS1P24557 533 aaPredicted RBP14.12□□□□□ -0.15
VCX3A-202ENST00000398729 PXNP49023 591 aaPredicted RBP14.12□□□□□ -0.15
VCX3A-202ENST00000398729 FMO5P49326 533 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 SHC2P98077 582 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 GAD2Q05329 585 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 CETN1Q12798 172 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 MORC3Q14149 939 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 LY6G5CQ5SRR4 150 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 TTI2Q6NXR4 508 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 CEP68Q76N32 757 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 CCDC186Q7Z3E2 898 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 TADA2BQ86TJ2 420 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 BBS7Q8IWZ6 715 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 DDX1Q92499 740 aaKnown RBP14.12□□□□□ -0.15
VCX3A-202ENST00000398729 PNKPQ96T60 521 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 UBXN6Q9BZV1 441 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 NMUR1Q9HB89 426 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 OSER1Q9NX31 292 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 DNMT3LQ9UJW3 386 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 NAGPAQ9UK23 515 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 CTNND2Q9UQB3 1225 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 USP3Q9Y6I4 520 aa14.12□□□□□ -0.15
VCX3A-202ENST00000398729 KIAA1549LQ6ZVL6 1849 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.11□□□□□ -0.15
VCX3A-202ENST00000398729 K7EQS6 105 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 PMM2O15305 246 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 FOXD2O60548 495 aaPredicted RBP14.11□□□□□ -0.15
VCX3A-202ENST00000398729 APODP05090 189 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 RALAP11233 206 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 RARGP13631 454 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 KCNA4P22459 653 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 SEC13P55735 322 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 DMC1Q14565 340 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 PREPLQ4J6C6 727 aaPredicted RBP14.11□□□□□ -0.15
VCX3A-202ENST00000398729 BTBD8Q5XKL5 378 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 IL31Q6EBC2 164 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 KLHDC10Q6PID8 442 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 KBTBD6Q86V97 674 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 ANKRD52Q8NB46 1076 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 USP33Q8TEY7 942 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 GAB3Q8WWW8 586 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 HHIPQ96QV1 700 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 CDK5RAP1Q96SZ6 601 aaKnown RBP14.11□□□□□ -0.15
VCX3A-202ENST00000398729 KLF16Q9BXK1 252 aaPredicted RBP14.11□□□□□ -0.15
VCX3A-202ENST00000398729 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.11□□□□□ -0.15
VCX3A-202ENST00000398729 CHMP5Q9NZZ3 219 aa14.11□□□□□ -0.15
VCX3A-202ENST00000398729 LSM7Q9UK45 103 aaKnown RBP14.11□□□□□ -0.15
VCX3A-202ENST00000398729 MYOFQ9NZM1 2061 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 RPP40O75818 363 aaKnown RBP14.1□□□□□ -0.15
VCX3A-202ENST00000398729 KAT7O95251 611 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 APBB3O95704 486 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 GNA14O95837 355 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 CCDC192P0DO97 292 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 CD19P15391 556 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 PLA2G4AP47712 749 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 SLC6A11P48066 632 aa14.1□□□□□ -0.15
VCX3A-202ENST00000398729 BCAT1P54687 386 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms