RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 LRRN4CLQ8ND94 238 aa12.14□□□□□ -0.47
TMF1-201ENST00000398559 PRCCQ92733 491 aaPredicted RBP12.14□□□□□ -0.47
TMF1-201ENST00000398559 DEPDC7Q96QD5 511 aa12.14□□□□□ -0.47
TMF1-201ENST00000398559 C1orf232A0A0U1RR37 186 aa12.14□□□□□ -0.47
TMF1-201ENST00000398559 GSTM1P09488 218 aa12.14□□□□□ -0.47
TMF1-201ENST00000398559 GPC1P35052 558 aa12.14□□□□□ -0.47
TMF1-201ENST00000398559 RFX3P48380 749 aa12.14□□□□□ -0.47
TMF1-201ENST00000398559 CDH18Q13634 790 aa12.14□□□□□ -0.47
TMF1-201ENST00000398559 ALFQ53S48 1182 aa12.14□□□□□ -0.47
TMF1-201ENST00000398559 RSBN1Q5VWQ0 802 aaPredicted RBP12.14□□□□□ -0.47
TMF1-201ENST00000398559 RPRD1AQ96P16 312 aaPredicted RBP12.14□□□□□ -0.47
TMF1-201ENST00000398559 SLITRK1Q96PX8 696 aa12.14□□□□□ -0.47
TMF1-201ENST00000398559 SEPHS2Q99611 448 aa12.14□□□□□ -0.47
TMF1-201ENST00000398559 DDX18Q9NVP1 670 aaKnown RBP12.14□□□□□ -0.47
TMF1-201ENST00000398559 GTF2A1LQ9UNN4 478 aa12.14□□□□□ -0.47
TMF1-201ENST00000398559 FAM25AB3EWG3 89 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 FAM25CB3EWG5 89 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 FAM25GB3EWG6 89 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 UBDO15205 165 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 PROSCO94903 275 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 ALDH1A3P47895 512 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 GLB1LQ6UWU2 654 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 CYP4Z1Q86W10 505 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 ZNF34Q8IZ26 560 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 TRAPPC9Q96Q05 1148 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 GPAMQ9HCL2 828 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 GEMIN8Q9NWZ8 242 aaKnown RBP12.13□□□□□ -0.47
TMF1-201ENST00000398559 NCKIPSDQ9NZQ3 722 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 DNALI1O14645 258 aaPredicted RBP12.13□□□□□ -0.47
TMF1-201ENST00000398559 FASP25445 335 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 SNX30Q5VWJ9 437 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 ERAP2Q6P179 960 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 LRRC74BQ6ZQY2 392 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 TLK2Q86UE8 772 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 TMPRSS6Q8IU80 811 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 PGBD3Q8N328 593 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 ZSWIM2Q8NEG5 633 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 SPRTNQ9H040 489 aaPredicted RBP12.13□□□□□ -0.47
TMF1-201ENST00000398559 CNGB3Q9NQW8 809 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 MPOP05164 745 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 EIF2S1P05198 315 aaKnown RBP12.13□□□□□ -0.47
TMF1-201ENST00000398559 RBP1P09455 135 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 PCNAP12004 261 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 RAG1P15918 1043 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 EIF2B2P49770 351 aaKnown RBP12.13□□□□□ -0.47
TMF1-201ENST00000398559 COLGALT1Q8NBJ5 622 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 VPS33AQ96AX1 596 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 ADAM30Q9UKF2 790 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 ZBTB7AO95365 584 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 GZMAP12544 262 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 MPP3Q13368 585 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 PKN2Q16513 984 aaKnown RBP12.13□□□□□ -0.47
TMF1-201ENST00000398559 B3GALNT2Q8NCR0 500 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 PPP2R3CQ969Q6 453 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 CRAMP1Q96RY5 1269 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 PAIP1Q9H074 479 aaKnown RBP12.13□□□□□ -0.47
TMF1-201ENST00000398559 CNOT7Q9UIV1 285 aaKnown RBP12.13□□□□□ -0.47
TMF1-201ENST00000398559 AP4E1Q9UPM8 1137 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 ACOT9Q9Y305 439 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 PLA2G6O60733 806 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 MT-CO1P00395 513 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 C4BPBP20851 252 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 ACO1P21399 889 aaKnown RBP12.13□□□□□ -0.47
TMF1-201ENST00000398559 NFIL3Q16649 462 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 N4BP2L1Q5TBK1 243 aaPredicted RBP12.13□□□□□ -0.47
TMF1-201ENST00000398559 OXNAD1Q96HP4 312 aaPredicted RBP12.13□□□□□ -0.47
TMF1-201ENST00000398559 COQ7Q99807 217 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 HDHD2Q9H0R4 259 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 MYLK2Q9H1R3 596 aa12.13□□□□□ -0.47
TMF1-201ENST00000398559 ZSCAN5CA6NGD5 496 aaPredicted RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 SLC2A3P11169 496 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 ST13P50502 369 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 ANXA11P50995 505 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 FAM153CQ494X1 144 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 RBM43Q6ZSC3 357 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 TMEM26Q6ZUK4 368 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 ANKRD49Q8WVL7 239 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 FIG4Q92562 907 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 C19orf60Q96EN9 201 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 NAT9Q9BTE0 207 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 REXO4Q9GZR2 422 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 DMAP1Q9NPF5 467 aaPredicted RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 TCF7L2Q9NQB0 619 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 DRG1Q9Y295 367 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 TNS3Q68CZ2 1445 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 OGTO15294 1046 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 ASS1P00966 412 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 COX10Q12887 443 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 TCP10LQ8TDR4 215 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 KCNH4Q9UQ05 1017 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 KLHL20Q9Y2M5 609 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 AK9Q5TCS8 1911 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 PBLDP30039 288 aaPredicted RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 C16orf72Q14CZ0 275 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 ARMC6Q6NXE6 501 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 FAM120BQ96EK7 910 aaKnown RBP12.12□□□□□ -0.47
TMF1-201ENST00000398559 DCUN1D5Q9BTE7 237 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 DCLK3Q9C098 648 aa12.12□□□□□ -0.47
TMF1-201ENST00000398559 KBTBD4Q9NVX7 518 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms