RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 IWS1Q96ST2 819 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 CITED2Q99967 270 aaPredicted RBP2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 MYOCQ99972 504 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 HTATIP2Q9BUP3 242 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 THUMPD3Q9BV44 507 aaKnown RBP2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 ACAT2Q9BWD1 397 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 TTYH3Q9C0H2 523 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 KLHL4Q9C0H6 718 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 TINAGL1Q9GZM7 467 aaPredicted RBP2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 DNAI2Q9GZS0 605 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 INTS2Q9H0H0 1204 aaKnown RBP2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 SIK2Q9H0K1 926 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 TTYH1Q9H313 450 aaPredicted RBP2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 ADAMTS10Q9H324 1103 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 TSPY26PQ9H489 355 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 FAM83DQ9H4H8 585 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 STN1Q9H668 368 aaKnown RBP2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 CCDC134Q9H6E4 229 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 BCAS3Q9H6U6 928 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 PLEKHA2Q9HB19 425 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 TRPV4Q9HBA0 871 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 BARX1Q9HBU1 254 aaPredicted RBP2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 TMLHEQ9NVH6 421 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 RLIMQ9NVW2 624 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 ING3Q9NXR8 418 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 ALKBH4Q9NXW9 302 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 COQ3Q9NZJ6 369 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 SLAMF8Q9P0V8 285 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 EPS15L1Q9UBC2 864 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 DKK4Q9UBT3 224 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 ZNF70Q9UC06 446 aaPredicted RBP2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 EBF1Q9UH73 591 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 LIMA1Q9UHB6 759 aaKnown RBP2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 TBK1Q9UHD2 729 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 CAPN11Q9UMQ6 739 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 NFU1Q9UMS0 254 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 SLC45A2Q9UMX9 530 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 RABL2BQ9UNT1 228 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 AGTPBP1Q9UPW5 1226 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 ATP11BQ9Y2G3 1177 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 GDAQ9Y2T3 454 aa2.28□□□□□ -2.04
HMGN2P39-201ENST00000398005 A0A0G2JNJ9 132 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 CCDC69A6NI79 296 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 FAM90A20PA6NIJ5 464 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 LIPT2A6NK58 231 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 PI4K2BG5E9Z4 385 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 DDX39AO00148 427 aaKnown RBP2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 CHL1O00533 1208 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 HNRNPRO43390 633 aaKnown RBP2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 SRGAP2O75044 1071 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 VPS4BO75351 444 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 TULP3O75386 442 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 TAF5LO75529 589 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 PDE8BO95263 885 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 LARGE1O95461 756 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 CER1O95813 267 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 CYBBP04839 570 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 DBHP09172 617 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 ZGLP1P0C6A0 271 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 MYBL1P10243 752 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 ARP10275 920 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 ALAS1P13196 640 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 KRT10P13645 584 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 ALADP13716 330 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 FOSL1P15407 271 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 GYPEP15421 78 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 IFNAR1P17181 557 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 HLA-DPA1P20036 260 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 TM4SF1P30408 202 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 TLX1P31314 330 aaPredicted RBP2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 MSX2P35548 267 aaPredicted RBP2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 BUD31P41223 144 aaPredicted RBP2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 GARSP41250 739 aaKnown RBP2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 VIPR2P41587 438 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 ZNF41P51814 821 aaPredicted RBP2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 PRKAG1P54619 331 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 RRP1P56182 461 aaKnown RBP2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 WNT3P56703 355 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 POLR2FP61218 127 aaKnown RBP2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 RAP2BP61225 183 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 PTH1RQ03431 593 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 GOLGA8DPQ0D2H9 430 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 PTP4A2Q12974 167 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 SP140Q13342 867 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 IKZF1Q13422 519 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 CAMK2DQ13557 499 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 TNFAIP1Q13829 316 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 BOP1Q14137 746 aaKnown RBP2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 KCNB1Q14721 858 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 SLMAPQ14BN4 828 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 IQCB1Q15051 598 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 STILQ15468 1287 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 NPY5RQ15761 445 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 ADIPOQQ15848 244 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 ZNF750Q32MQ0 723 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 MGAT5BQ3V5L5 792 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 C5orf22Q49AR2 442 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 LRRC24Q50LG9 513 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 PARP10Q53GL7 1025 aa2.27□□□□□ -2.05
HMGN2P39-201ENST00000398005 KRTCAP3Q53RY4 240 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms