RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 CCNG2Q16589 344 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 MSS51Q4VC12 460 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 FYB2Q5VWT5 728 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 SCYL2Q6P3W7 929 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 C1orf228Q6PIY5 440 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 C15orf39Q6ZRI6 1047 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 RFX8Q6ZV50 586 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 CROCCP3Q8IVE0 287 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 NUP93Q8N1F7 819 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 WDTC1Q8N5D0 677 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 FAM71DQ8N9W8 422 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 C12orf50Q8NA57 414 aaPredicted RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 ACTL9Q8TC94 416 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 TRPM4Q8TD43 1214 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 GAB3Q8WWW8 586 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 ZMAT2Q96NC0 199 aaKnown RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 SLITRK1Q96PX8 696 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 MIPEPQ99797 713 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 CCDC77Q9BR77 488 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 TRIM56Q9BRZ2 755 aaKnown RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 PORCNQ9H237 461 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 NPHS2Q9NP85 383 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 PDLIM7Q9NR12 457 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 GINM1Q9NU53 330 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 DDX18Q9NVP1 670 aaKnown RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 GGA3Q9NZ52 723 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 FAF1Q9UNN5 650 aaPredicted RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 WASF2Q9Y6W5 498 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 COL11A1P12107 1806 aaPredicted RBP5.22□□□□□ -1.57
SSR1-202ENST00000397511 ATP8B3O60423 1300 aa5.22□□□□□ -1.57
SSR1-202ENST00000397511 ARHGAP10A1A4S6 786 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 SPDYE16A6NNV3 312 aaPredicted RBP5.21□□□□□ -1.57
SSR1-202ENST00000397511 NFKBIEO00221 500 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 NOP56O00567 594 aaKnown RBP5.21□□□□□ -1.57
SSR1-202ENST00000397511 MAGEB2O15479 319 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 KRT38O76015 456 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 CXCL8P10145 99 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 FGFR1P11362 822 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 GCAP28676 217 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 CETN2P41208 172 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 HALP42357 657 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 SLC1A1P43005 524 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 NEK2P51955 445 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 AP2B1P63010 937 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 SLC1A5Q15758 541 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 SEPT7Q16181 437 aaKnown RBP5.21□□□□□ -1.57
SSR1-202ENST00000397511 ZNF699Q32M78 642 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 FNBP1LQ5T0N5 605 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 DENND1BQ6P3S1 775 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 SPOCD1Q6ZMY3 1216 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 RBM44Q6ZP01 1051 aaKnown RBP5.21□□□□□ -1.57
SSR1-202ENST00000397511 GADL1Q6ZQY3 521 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 C3orf62Q6ZUJ4 267 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 MOB2Q70IA6 237 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 PATL1Q86TB9 770 aaKnown RBP5.21□□□□□ -1.57
SSR1-202ENST00000397511 ALDH16A1Q8IZ83 802 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 VTI1AQ96AJ9 217 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 MAK16Q9BXY0 300 aaKnown RBP5.21□□□□□ -1.57
SSR1-202ENST00000397511 TRABDQ9H4I3 376 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 PIH1D1Q9NWS0 290 aaKnown RBP5.21□□□□□ -1.57
SSR1-202ENST00000397511 CYTH4Q9UIA0 394 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 HEY1Q9Y5J3 304 aa5.21□□□□□ -1.57
SSR1-202ENST00000397511 CNTNAP2Q9UHC6 1331 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 A0A0B4J269 797 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 A0A0G2JND7 137 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 TMEM191CA6NGB0 347 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 FAM47DPA6NHR8 397 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 SPATA31C2B4DYI2 1134 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 F8W8V4 182 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 ADCY3O60266 1144 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 CIB2O75838 187 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 STAM2O75886 525 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 FAM155BO75949 473 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 HAUS5O94927 633 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 OR6B1O95007 311 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 KRT3P12035 628 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 ANPEPP15144 967 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 MMP8P22894 467 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 ADRA1DP25100 572 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 KLRC2P26717 231 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 CA8P35219 290 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 RGS7P49802 495 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 TGFB2P61812 414 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 PSMC1P62191 440 aaKnown RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 ASPHQ12797 758 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 PTP4A2Q12974 167 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 CDC16Q13042 620 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 ITGA7Q13683 1181 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 GRM2Q14416 872 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 INAQ16352 499 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 AMHR2Q16671 573 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 ZNF568Q3ZCX4 644 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 PTPN20Q4JDL3 420 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 EAPPQ56P03 285 aaPredicted RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 DALRD3Q5D0E6 543 aaKnown RBP5.21□□□□□ -1.58
SSR1-202ENST00000397511 FKBP1CQ5VVH2 108 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 EEF1DP3Q658K8 133 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 PLEKHA7Q6IQ23 1121 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 ZNF280DQ6N043 979 aa5.21□□□□□ -1.58
SSR1-202ENST00000397511 KLHL35Q6PF15 583 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms