RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 SDE2Q6IQ49 451 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 RHBDF2Q6PJF5 856 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 DENND5BQ6ZUT9 1274 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 USP49Q70CQ1 688 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 DPH6Q7L8W6 267 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 ERICH1Q86X53 443 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 BRSK2Q8IWQ3 736 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 CHPFQ8IZ52 775 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 ADGRF2Q8IZF7 708 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 PHTF2Q8N3S3 785 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 NAT16Q8N8M0 369 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 ZNF248Q8NDW4 579 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
NEDD9-203ENST00000397378 POMGNT1Q8WZA1 660 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 TTC9Q92623 222 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 HVCN1Q96D96 273 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 CALML4Q96GE6 196 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 TOE1Q96GM8 510 aaKnown RBP10.04□□□□□ -0.8
NEDD9-203ENST00000397378 ZSCAN31Q96LW9 406 aaPredicted RBP10.04□□□□□ -0.8
NEDD9-203ENST00000397378 GPR174Q9BXC1 333 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 RNF38Q9H0F5 515 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 KCNK4Q9NYG8 393 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 EHD2Q9NZN4 543 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 MAGEC2Q9UBF1 373 aaPredicted RBP10.04□□□□□ -0.8
NEDD9-203ENST00000397378 ITGA11Q9UKX5 1188 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 PAXBP1Q9Y5B6 917 aa10.04□□□□□ -0.8
NEDD9-203ENST00000397378 A0A1W2PQF6 199 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 ZNF840PA6NDX5 716 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 ENO4A6NNW6 628 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 TBCAO75347 108 aaKnown RBP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 RFPL3O75679 317 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 PPP1R37O75864 691 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 OAS1P00973 400 aaKnown RBP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 KRT18P05783 430 aaKnown RBP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 CSNK1EP49674 416 aaKnown RBP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 CCT8P50990 548 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 WNT7BP56706 349 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 USP46P62068 366 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 NOP14P78316 857 aaKnown RBP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 IL9RQ01113 521 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 DHX8Q14562 1220 aaKnown RBP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 MCM6Q14566 821 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 MAPRE1Q15691 268 aaKnown RBP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 SOWAHAQ2M3V2 549 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 ZNF574Q6ZN55 896 aaPredicted RBP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 NUDT18Q6ZVK8 323 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 ZNF720Q7Z2F6 126 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 LIMS2Q7Z4I7 341 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 DDX42Q86XP3 938 aaKnown RBP eCLIP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 CSGALNACT2Q8N6G5 542 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 RAD54LQ92698 747 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 OTUB2Q96DC9 234 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 ZFRQ96KR1 1074 aaKnown RBP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 MRGPRX1Q96LB2 322 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 TEP1Q99973 2627 aaKnown RBP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 STRA6Q9BX79 667 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 ZHX3Q9H4I2 956 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 TBC1D14Q9P2M4 693 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 EIF2B4Q9UI10 523 aaKnown RBP10.03□□□□□ -0.8
NEDD9-203ENST00000397378 CDH9Q9ULB4 789 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 NFE2L3Q9Y4A8 694 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 PCDHGA1Q9Y5H4 931 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 SNX11Q9Y5W9 270 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 SNX9Q9Y5X1 595 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 RAD54BQ9Y620 910 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 CPQQ9Y646 472 aa10.03□□□□□ -0.8
NEDD9-203ENST00000397378 E2F8A0AVK6 867 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 KCNK3O14649 394 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 ENC1O14682 589 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 TRIM66O15016 1216 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 HCRTO43612 131 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 ATP2C2O75185 946 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 LDHAP00338 332 aaKnown RBP10.02□□□□□ -0.81
NEDD9-203ENST00000397378 PLCG1P19174 1290 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 BDNFP23560 247 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 ANXA13P27216 316 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 GRIK1P39086 918 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 UBA7P41226 1012 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 PCBP4P57723 403 aaKnown RBP10.02□□□□□ -0.81
NEDD9-203ENST00000397378 RBP5P82980 135 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 GAD2Q05329 585 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 KIF19Q2TAC6 998 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 C4orf17Q53FE4 359 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 BTBD8Q5XKL5 378 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 EGFLAMQ63HQ2 1017 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 MIB1Q86YT6 1006 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 ETFBKMTQ8IXQ9 262 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 CADM4Q8NFZ8 388 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 KBTBD7Q8WVZ9 684 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 SNX19Q92543 992 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 MYLPFQ96A32 169 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 DUSP9Q99956 384 aaKnown RBP10.02□□□□□ -0.81
NEDD9-203ENST00000397378 SYT15Q9BQS2 421 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 FAM213AQ9BRX8 229 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 IKZF4Q9H2S9 585 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 CRTAC1Q9NQ79 661 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 SMPD4Q9NXE4 827 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 WSB2Q9NYS7 404 aaPredicted RBP10.02□□□□□ -0.81
NEDD9-203ENST00000397378 CFAP97Q9P2B7 532 aa10.02□□□□□ -0.81
NEDD9-203ENST00000397378 DEC1Q9P2X7 70 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms