RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SLC35G2Q8TBE7 412 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 ARHGEF26Q96DR7 871 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 HINFPQ9BQA5 517 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 MIS12Q9H081 205 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 ST7Q9NRC1 585 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 STRIP2Q9ULQ0 834 aa13.93□□□□□ -0.18
SEC13-209ENST00000397117 EPG5Q9HCE0 2579 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 H7C4K7 107 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 ADAM12O43184 909 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 ATMINO43313 823 aaPredicted RBP13.92□□□□□ -0.18
SEC13-209ENST00000397117 MOCS3O95396 460 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 CYP1A2P05177 515 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 POU2F2P09086 479 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 FAM200BP0CF97 657 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 PDCLQ13371 301 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 CTXN3Q4LDR2 81 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 PPM1LQ5SGD2 360 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 RSPO2Q6UXX9 243 aaPredicted RBP13.92□□□□□ -0.18
SEC13-209ENST00000397117 SYT10Q6XYQ8 523 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 ANKS3Q6ZW76 656 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 TTC30AQ86WT1 665 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 DCP1BQ8IZD4 617 aaKnown RBP13.92□□□□□ -0.18
SEC13-209ENST00000397117 FUKQ8N0W3 1084 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 TRIM58Q8NG06 486 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 IPO4Q8TEX9 1081 aaKnown RBP13.92□□□□□ -0.18
SEC13-209ENST00000397117 ZNF592Q92610 1267 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 C18orf8Q96DM3 657 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 PCED1BQ96HM7 432 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 CALR3Q96L12 384 aaKnown RBP13.92□□□□□ -0.18
SEC13-209ENST00000397117 AVENQ9NQS1 362 aaPredicted RBP13.92□□□□□ -0.18
SEC13-209ENST00000397117 UVRAGQ9P2Y5 699 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 DNAI1Q9UI46 699 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 CYTH4Q9UIA0 394 aa13.92□□□□□ -0.18
SEC13-209ENST00000397117 OR6C75A6NL08 312 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 FAM170BA6NMN3 283 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 CLDN5O00501 218 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 C8AP07357 584 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 RRM1P23921 792 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 PDE4CQ08493 712 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 PSMD5Q16401 504 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 RSPO4Q2I0M5 234 aaPredicted RBP13.91□□□□□ -0.18
SEC13-209ENST00000397117 PKDCCQ504Y2 493 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 C2CD6Q53TS8 623 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 FAM171BQ6P995 826 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 C4orf50Q6ZRC1 276 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 PHLDB2Q86SQ0 1253 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 NELL1Q92832 810 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 MYLPFQ96A32 169 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 NUP85Q9BW27 656 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 DUSP16Q9BY84 665 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 OXCT2Q9BYC2 517 aaPredicted RBP13.91□□□□□ -0.18
SEC13-209ENST00000397117 B3GNT5Q9BYG0 378 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 MRPL47Q9HD33 250 aaKnown RBP13.91□□□□□ -0.18
SEC13-209ENST00000397117 KRT82Q9NSB4 513 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 PARVAQ9NVD7 372 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 SPATA6Q9NWH7 488 aaPredicted RBP13.91□□□□□ -0.18
SEC13-209ENST00000397117 SALL4Q9UJQ4 1053 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 SCINQ9Y6U3 715 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 F5P12259 2224 aa13.91□□□□□ -0.18
SEC13-209ENST00000397117 CCL16O15467 120 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 LAMTOR5O43504 91 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 XYLBO75191 536 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 AP1G2O75843 785 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 CASQ1P31415 396 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 RAB33AQ14088 237 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 MRPL58Q14197 206 aaKnown RBP13.9□□□□□ -0.18
SEC13-209ENST00000397117 CCDC142Q17RM4 750 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 PTPN20Q4JDL3 420 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 CYP4A22Q5TCH4 519 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 DNAJC24Q6P3W2 148 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 FAM35AQ86V20 835 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 SPATA2LQ8IUW3 424 aaPredicted RBP13.9□□□□□ -0.18
SEC13-209ENST00000397117 SLC35F6Q8N357 371 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 STK32AQ8WU08 396 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 SLC35F5Q8WV83 523 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 CLDN23Q96B33 292 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 SMARCD1Q96GM5 515 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 TMEM209Q96SK2 561 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 CPXM1Q96SM3 734 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 ZCWPW1Q9H0M4 648 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 LTB4R2Q9NPC1 389 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 OSGEPQ9NPF4 335 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 WDR35Q9P2L0 1181 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 CHORDC1Q9UHD1 332 aaPredicted RBP13.9□□□□□ -0.18
SEC13-209ENST00000397117 TSC2P49815 1807 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 ACACBO00763 2458 aa13.9□□□□□ -0.18
SEC13-209ENST00000397117 XPO1O14980 1071 aaKnown RBP13.9□□□□□ -0.19
SEC13-209ENST00000397117 CD72P21854 359 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 MAGEA9P43362 315 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 RGS7P49802 495 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 CDR1P51861 262 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 PFKPQ01813 784 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 CSTF1Q05048 431 aaKnown RBP13.9□□□□□ -0.19
SEC13-209ENST00000397117 PTP4A2Q12974 167 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 UBXN2BQ14CS0 331 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 TCEAL1Q15170 157 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 NFE2Q16621 373 aaPredicted RBP13.9□□□□□ -0.19
SEC13-209ENST00000397117 SLC39A12Q504Y0 691 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 PMF1Q6P1K2 205 aa13.9□□□□□ -0.19
SEC13-209ENST00000397117 LRRTM3Q86VH5 581 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms