RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CSTF1Q05048 431 aaKnown RBP15.32■□□□□ 0.04
SEC13-208ENST00000397109 GOLGA8FQ08AF8 430 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 GOLGA8DPQ0D2H9 430 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 RAB41Q5JT25 222 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 GBP6Q6ZN66 633 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 RRAGAQ7L523 313 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 ENOSF1Q7L5Y1 443 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 TTC30AQ86WT1 665 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 ADGRG2Q8IZP9 1017 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 ZFRQ96KR1 1074 aaKnown RBP15.32■□□□□ 0.04
SEC13-208ENST00000397109 P2RY13Q9BPV8 354 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 FAM126AQ9BYI3 521 aaPredicted RBP15.32■□□□□ 0.04
SEC13-208ENST00000397109 PRMT8Q9NR22 394 aaPredicted RBP15.32■□□□□ 0.04
SEC13-208ENST00000397109 SAMSN1Q9NSI8 373 aaKnown RBP15.32■□□□□ 0.04
SEC13-208ENST00000397109 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.32■□□□□ 0.04
SEC13-208ENST00000397109 FANCLQ9NW38 375 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 CLIC5Q9NZA1 410 aa15.32■□□□□ 0.04
SEC13-208ENST00000397109 MYO16Q9Y6X6 1858 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 PTPRZ1P23471 2315 aaPredicted RBP15.31■□□□□ 0.04
SEC13-208ENST00000397109 A0A1W2PQH9 124 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 O00370 1275 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 CBFA2T2O43439 604 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 RARGP13631 454 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 CXCL12P48061 93 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 GALK1P51570 392 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 PDE4CQ08493 712 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 CNGA2Q16280 664 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 FBXO43Q4G163 708 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 SMYD5Q6GMV2 418 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 LCLAT1Q6UWP7 414 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 ARHGEF19Q8IW93 802 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 RBBP8NLQ8NC74 664 aaPredicted RBP15.31■□□□□ 0.04
SEC13-208ENST00000397109 KAT5Q92993 513 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 CD101Q93033 1021 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 NKD2Q969F2 451 aaPredicted RBP15.31■□□□□ 0.04
SEC13-208ENST00000397109 NMUR1Q9HB89 426 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 LRRC4Q9HBW1 653 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 UBE2TQ9NPD8 197 aaPredicted RBP15.31■□□□□ 0.04
SEC13-208ENST00000397109 RBM12Q9NTZ6 932 aaKnown RBP15.31■□□□□ 0.04
SEC13-208ENST00000397109 IMPACTQ9P2X3 320 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 DNMT3LQ9UJW3 386 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 NAGPAQ9UK23 515 aa15.31■□□□□ 0.04
SEC13-208ENST00000397109 RIF1Q5UIP0 2472 aaKnown RBP15.31■□□□□ 0.04
SEC13-208ENST00000397109 ZNF500O60304 480 aaPredicted RBP15.3■□□□□ 0.04
SEC13-208ENST00000397109 ADH1CP00326 375 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 PLA2G4AP47712 749 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 PGFP49763 221 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 NRLP54845 237 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 MFAP3P55082 362 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 DHCR24Q15392 516 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 MAN2A1Q16706 1144 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 EXOC3L4Q17RC7 722 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 PM20D1Q6GTS8 502 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 FSTL4Q6MZW2 842 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 SCD5Q86SK9 330 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 CCDC26Q8TAB7 109 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 CHFRQ96EP1 664 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 KREMEN1Q96MU8 473 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 KLF16Q9BXK1 252 aaPredicted RBP15.3■□□□□ 0.04
SEC13-208ENST00000397109 OSER1Q9NX31 292 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 LSM7Q9UK45 103 aaKnown RBP15.3■□□□□ 0.04
SEC13-208ENST00000397109 CNTN6Q9UQ52 1028 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 PCDHGA2Q9Y5H1 932 aa15.3■□□□□ 0.04
SEC13-208ENST00000397109 ZFHX2Q9C0A1 2572 aaPredicted RBP15.3■□□□□ 0.04
SEC13-208ENST00000397109 FANCMQ8IYD8 2048 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 RNF225M0QZC1 329 aaPredicted RBP15.29■□□□□ 0.04
SEC13-208ENST00000397109 ATG13O75143 517 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 TBX18O95935 607 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 ZBED1O96006 694 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 CYP17A1P05093 508 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 TKTL1P51854 596 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 ZNF132P52740 706 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 GAS6Q14393 721 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 PKDCCQ504Y2 493 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 TCP11X2Q5H9J9 407 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 C10orf120Q5SQS8 335 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 TRIM65Q6PJ69 517 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 HTR3DQ70Z44 454 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 UBA3Q8TBC4 463 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 ATRIPQ8WXE1 791 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 KCTD13Q8WZ19 329 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 TFAP2BQ92481 460 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 CRACR2AQ9BSW2 395 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 ZSCAN32Q9NX65 697 aa15.29■□□□□ 0.04
SEC13-208ENST00000397109 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.29■□□□□ 0.04
SEC13-208ENST00000397109 LRRC10BA6NIK2 292 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 KCNJ18B7U540 433 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 GFRA3O60609 400 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 PAPSS2O95340 614 aaPredicted RBP15.28■□□□□ 0.04
SEC13-208ENST00000397109 IRF1P10914 325 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 KRT5P13647 590 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 KCNJ12Q14500 433 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 DRC7Q8IY82 874 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 SCML4Q8N228 414 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 NELL1Q92832 810 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 ULBP1Q9BZM6 244 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 APEX2Q9UBZ4 518 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 R4GN57 208 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 FAM186AA6NE01 2351 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 ATG2BQ96BY7 2078 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms