RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DPEP3Q9H4B8 488 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 CCDC39Q9UFE4 941 aa15.87■□□□□ 0.13
SEC13-206ENST00000397102 CHORDC1Q9UHD1 332 aaPredicted RBP15.87■□□□□ 0.13
SEC13-206ENST00000397102 URB1O60287 2271 aaKnown RBP15.87■□□□□ 0.13
SEC13-206ENST00000397102 FRMD3A2A2Y4 597 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 PRRT4C9JH25 899 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 NEDD8-MDP1E9PL57 170 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 DKK1O94907 266 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 CER1O95813 267 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 ZDHHC11BP0C7U3 371 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 IRF1P10914 325 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 IDEP14735 1019 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 GJB2P29033 226 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 SF3A1Q15459 793 aaKnown RBP15.86■□□□□ 0.13
SEC13-206ENST00000397102 USP49Q70CQ1 688 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 SV2BQ7L1I2 683 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 TRAPPC11Q7Z392 1133 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 METTL3Q86U44 580 aaKnown RBP15.86■□□□□ 0.13
SEC13-206ENST00000397102 CBWD2Q8IUF1 395 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 ZCCHC9Q8N567 271 aaKnown RBP15.86■□□□□ 0.13
SEC13-206ENST00000397102 B3GALNT2Q8NCR0 500 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 BBS2Q9BXC9 721 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 GAREM1Q9H706 876 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 IL21RQ9HBE5 538 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 TM7SF3Q9NS93 570 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 TOR4AQ9NXH8 423 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 CACNA2D2Q9NY47 1150 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 WSB2Q9NYS7 404 aaPredicted RBP15.86■□□□□ 0.13
SEC13-206ENST00000397102 IL37Q9NZH6 218 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 MARK1Q9P0L2 795 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 MYH10P35580 1976 aa15.86■□□□□ 0.13
SEC13-206ENST00000397102 FAM92AA1XBS5 289 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 A8MXQ7 604 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 ZIC2O95409 532 aaPredicted RBP15.85■□□□□ 0.13
SEC13-206ENST00000397102 CST3P01034 146 aaPredicted RBP15.85■□□□□ 0.13
SEC13-206ENST00000397102 NCAM1P13591 858 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 TYRP14679 529 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 MATKP42679 507 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 SLC5A3P53794 718 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 TNNC1P63316 161 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 IL27RAQ6UWB1 636 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 HTR3DQ70Z44 454 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 SCUBE3Q8IX30 993 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 CADM4Q8NFZ8 388 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 SCAMP5Q8TAC9 235 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 TOE1Q96GM8 510 aaKnown RBP15.85■□□□□ 0.13
SEC13-206ENST00000397102 KCNK16Q96T55 309 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 CDC6Q99741 560 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 NACA2Q9H009 215 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 COMMD8Q9NX08 183 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 GMIPQ9P107 970 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 USP36Q9P275 1121 aaKnown RBP15.85■□□□□ 0.13
SEC13-206ENST00000397102 WDR35Q9P2L0 1181 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 ATP8B3O60423 1300 aa15.85■□□□□ 0.13
SEC13-206ENST00000397102 CELSR3Q9NYQ7 3312 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 SETXQ7Z333 2677 aaKnown RBP15.84■□□□□ 0.13
SEC13-206ENST00000397102 A0A087WV48 116 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 FLRT2O43155 660 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 GREM1O60565 184 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 CILPO75339 1184 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 DGKGP49619 791 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 CYP4F3Q08477 520 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 WDR72Q3MJ13 1102 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 RRAGBQ5VZM2 374 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 DBX2Q6ZNG2 339 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 BRAPQ7Z569 592 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 FAM35AQ86V20 835 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 GALNT15Q8N3T1 639 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 ADAM32Q8TC27 787 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 GPR174Q9BXC1 333 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 MIR1-1HGQ9H1L0 117 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 PRDM16Q9HAZ2 1276 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 KIAA1586Q9HCI6 787 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 DMAP1Q9NPF5 467 aaPredicted RBP15.84■□□□□ 0.13
SEC13-206ENST00000397102 FNDC3AQ9Y2H6 1198 aaKnown RBP15.84■□□□□ 0.13
SEC13-206ENST00000397102 PCDHGB2Q9Y5G2 931 aa15.84■□□□□ 0.13
SEC13-206ENST00000397102 TRABD2BA6NFA1 517 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 WASH3PC4AMC7 463 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 BCAT2O15382 392 aaPredicted RBP15.83■□□□□ 0.12
SEC13-206ENST00000397102 TLR5O60602 858 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 STAU1O95793 577 aaKnown RBP15.83■□□□□ 0.12
SEC13-206ENST00000397102 CISD3P0C7P0 127 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 ATXN1LP0C7T5 689 aaKnown RBP15.83■□□□□ 0.12
SEC13-206ENST00000397102 ZNF132P52740 706 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 BNC1Q01954 994 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 STARD3Q14849 445 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 HLA-BQ31612 363 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 FUT11Q495W5 492 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 DCAF12L1Q5VU92 463 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 TPGS1Q6ZTW0 290 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 RHBDD1Q8TEB9 315 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 KLF16Q9BXK1 252 aaPredicted RBP15.83■□□□□ 0.12
SEC13-206ENST00000397102 ITM2CQ9NQX7 267 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.83■□□□□ 0.123e-6■■■■■ 52.1
SEC13-206ENST00000397102 PANK4Q9NVE7 773 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 HSPBP1Q9NZL4 362 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 LSM7Q9UK45 103 aaKnown RBP15.83■□□□□ 0.12
SEC13-206ENST00000397102 STON1Q9Y6Q2 735 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 SHROOM3Q8TF72 1996 aa15.83■□□□□ 0.12
SEC13-206ENST00000397102 METTL12A8MUP2 240 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms