RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 MYLPFQ96A32 169 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 DDX27Q96GQ7 796 aaKnown RBP15.79■□□□□ 0.12
MCF2L-205ENST00000397017 RILPQ96NA2 401 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 FSD1LQ9BXM9 530 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 TMPRSS4Q9NRS4 437 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 SYF2O95926 243 aaKnown RBP15.79■□□□□ 0.12
MCF2L-205ENST00000397017 GPD2P43304 727 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 CAV1Q03135 178 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 BZW1Q7L1Q6 419 aaKnown RBP15.79■□□□□ 0.12
MCF2L-205ENST00000397017 UNC45BQ8IWX7 931 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 LRRC52Q8N7C0 313 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 FBXO32Q969P5 355 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 VPS11Q9H270 941 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 TSR3Q9UJK0 312 aaKnown RBP15.79■□□□□ 0.12
MCF2L-205ENST00000397017 ADGRA2Q96PE1 1338 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 LOC102724159A0A0B4J2E5 919 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 PAPSS1O43252 624 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-205ENST00000397017 FKTNO75072 461 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 JCHAINP01591 159 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 APOEP02649 317 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 IL1R2P27930 398 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 PEX5P50542 639 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 PWP2Q15269 919 aaKnown RBP15.79■□□□□ 0.12
MCF2L-205ENST00000397017 G3BP2Q9UN86 482 aaKnown RBP15.79■□□□□ 0.12
MCF2L-205ENST00000397017 STK38LQ9Y2H1 464 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 SNX10Q9Y5X0 201 aa15.79■□□□□ 0.12
MCF2L-205ENST00000397017 SPTLC1O15269 473 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 SETDB1Q15047 1291 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 CFAP157Q5JU67 520 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 LCLAT1Q6UWP7 414 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 IPMKQ8NFU5 416 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 TMEM169Q96HH4 297 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 LGMNQ99538 433 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 DDX20Q9UHI6 824 aaKnown RBP15.78■□□□□ 0.12
MCF2L-205ENST00000397017 SFMBT1Q9UHJ3 866 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 DCTN4Q9UJW0 460 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 STXBP5LQ9Y2K9 1186 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 FIS1Q9Y3D6 152 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 CITO14578 2027 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 SDK1Q7Z5N4 2213 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 AVILO75366 819 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 IL9RQ01113 521 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 BFSP2Q13515 415 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 C15orf39Q6ZRI6 1047 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 SLC25A41Q8N5S1 370 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 SEPT8Q92599 483 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 CREBZFQ9NS37 354 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 TMEM120BA0PK00 339 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 FSCN2O14926 492 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 TRUB2O95900 331 aaKnown RBP15.78■□□□□ 0.12
MCF2L-205ENST00000397017 TIGD5Q53EQ6 642 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 TTMPQ5BVD1 217 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 KIF9Q9HAQ2 790 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 TMEM39AQ9NV64 488 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 SRRDQ9UH36 339 aa15.78■□□□□ 0.12
MCF2L-205ENST00000397017 hCG_1818297A0A087WSY0 165 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 MDM4O15151 490 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 MSI1O43347 362 aaKnown RBP15.77■□□□□ 0.12
MCF2L-205ENST00000397017 KITP10721 976 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 RARGP13631 454 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 TPH1P17752 444 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 MDH1P40925 334 aaKnown RBP15.77■□□□□ 0.12
MCF2L-205ENST00000397017 DUPD1Q68J44 220 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 CHSY1Q86X52 802 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 DCP1BQ8IZD4 617 aaKnown RBP15.77■□□□□ 0.12
MCF2L-205ENST00000397017 MSL3Q8N5Y2 521 aaKnown RBP15.77■□□□□ 0.12
MCF2L-205ENST00000397017 AGR3Q8TD06 166 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 CAVIN3Q969G5 261 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 PCED1BQ96HM7 432 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 TKTL2Q9H0I9 626 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.77■□□□□ 0.12
MCF2L-205ENST00000397017 CYTH4Q9UIA0 394 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 TOMM70O94826 608 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 LTFP02788 710 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 UNC93AQ86WB7 457 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 RASGEF1CQ8N431 466 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 GLIS1Q8NBF1 620 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 MAGEB5Q9BZ81 275 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 TRABDQ9H4I3 376 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 CAPN7Q9Y6W3 813 aa15.77■□□□□ 0.12
MCF2L-205ENST00000397017 LPXNO60711 386 aa15.77■□□□□ 0.11
MCF2L-205ENST00000397017 LSP1P33241 339 aa15.77■□□□□ 0.11
MCF2L-205ENST00000397017 HSPA9P38646 679 aaKnown RBP15.77■□□□□ 0.11
MCF2L-205ENST00000397017 GBE1Q04446 702 aa15.77■□□□□ 0.11
MCF2L-205ENST00000397017 CA9Q16790 459 aa15.77■□□□□ 0.11
MCF2L-205ENST00000397017 MROH9Q5TGP6 573 aa15.77■□□□□ 0.11
MCF2L-205ENST00000397017 FAM35AQ86V20 835 aa15.77■□□□□ 0.11
MCF2L-205ENST00000397017 PPIL6Q8IXY8 311 aa15.77■□□□□ 0.11
MCF2L-205ENST00000397017 TFB1MQ8WVM0 346 aaKnown RBP15.77■□□□□ 0.11
MCF2L-205ENST00000397017 RPRD1AQ96P16 312 aaPredicted RBP15.77■□□□□ 0.11
MCF2L-205ENST00000397017 SP110Q9HB58 689 aa15.77■□□□□ 0.11
MCF2L-205ENST00000397017 PPP1R12AO14974 1030 aaPredicted RBP15.76■□□□□ 0.11
MCF2L-205ENST00000397017 LIASO43766 372 aa15.76■□□□□ 0.11
MCF2L-205ENST00000397017 NOMO2Q5JPE7 1267 aa15.76■□□□□ 0.11
MCF2L-205ENST00000397017 WDTC1Q8N5D0 677 aa15.76■□□□□ 0.11
MCF2L-205ENST00000397017 PDCD7Q8N8D1 485 aaKnown RBP15.76■□□□□ 0.11
MCF2L-205ENST00000397017 OR6P1Q8NGX9 317 aa15.76■□□□□ 0.11
MCF2L-205ENST00000397017 ATP2A3Q93084 1043 aa15.76■□□□□ 0.11
MCF2L-205ENST00000397017 SMARCD1Q96GM5 515 aa15.76■□□□□ 0.11
MCF2L-205ENST00000397017 GNEQ9Y223 722 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms