RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 SLC36A4Q6YBV0 504 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 ACOT1Q86TX2 421 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 BBS7Q8IWZ6 715 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 ZNF513Q8N8E2 541 aaPredicted RBP17.22■□□□□ 0.35
CLTA-203ENST00000396603 ZMIZ2Q8NF64 920 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 SLC2A14Q8TDB8 520 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 PAGE5Q96GU1 130 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 XPO6Q96QU8 1125 aaKnown RBP17.22■□□□□ 0.35
CLTA-203ENST00000396603 SMOQ99835 787 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 NUSAP1Q9BXS6 441 aaKnown RBP17.22■□□□□ 0.35
CLTA-203ENST00000396603 IMPG2Q9BZV3 1241 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 SDCBP2Q9H190 292 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 FAM124BQ9H5Z6 455 aaPredicted RBP17.22■□□□□ 0.35
CLTA-203ENST00000396603 CYP3A43Q9HB55 503 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLTA-203ENST00000396603 BCCIPQ9P287 314 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLTA-203ENST00000396603 WDR35Q9P2L0 1181 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 SCML2Q9UQR0 700 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 FRMD4BQ9Y2L6 1034 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 PCDHA5Q9Y5H7 936 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 ATG2BQ96BY7 2078 aa17.22■□□□□ 0.35
CLTA-203ENST00000396603 CNOT1A5YKK6 2376 aaKnown RBP17.22■□□□□ 0.35
CLTA-203ENST00000396603 PLXND1Q9Y4D7 1925 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 UPK3BL1B0FP48 263 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 UPK3BL2E5RIL1 263 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 MAP3K13O43283 966 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 AP5Z1O43299 807 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 CALUO43852 315 aaPredicted RBP17.21■□□□□ 0.35
CLTA-203ENST00000396603 CACNG3O60359 315 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 GREM1O60565 184 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 ZNF217O75362 1048 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 CLSTN1O94985 981 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 FAM200BP0CF97 657 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 ATP5C1P36542 298 aaKnown RBP17.21■□□□□ 0.35
CLTA-203ENST00000396603 ASPAP45381 313 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 PSEN1P49768 467 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 NDST1P52848 882 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 UBE2HP62256 183 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 KDSRQ06136 332 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 KMT5BQ4FZB7 885 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 SCARA5Q6ZMJ2 495 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 KRBA2Q6ZNG9 492 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 SV2AQ7L0J3 742 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 TADA2BQ86TJ2 420 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 CEP76Q8TAP6 659 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 CDK5RAP1Q96SZ6 601 aaKnown RBP17.21■□□□□ 0.35
CLTA-203ENST00000396603 HNRNPABQ99729 332 aaKnown RBP17.21■□□□□ 0.35
CLTA-203ENST00000396603 LSM7Q9UK45 103 aaKnown RBP17.21■□□□□ 0.35
CLTA-203ENST00000396603 INVSQ9Y283 1065 aa17.21■□□□□ 0.35
CLTA-203ENST00000396603 TCRBV21S2A2A0A5A6 115 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 ZBTB24O43167 697 aaPredicted RBP17.2■□□□□ 0.34
CLTA-203ENST00000396603 NTSR1P30989 418 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 ANO4Q32M45 955 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 TRIM61Q5EBN2 209 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 C10orf76Q5T2E6 689 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 LYSMD4Q5XG99 296 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 GRAMD4Q6IC98 578 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 INTS8Q75QN2 995 aaKnown RBP17.2■□□□□ 0.34
CLTA-203ENST00000396603 SFTPA1Q8IWL2 248 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 TTC39CQ8N584 583 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 HMGB4Q8WW32 186 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 PIGKQ92643 395 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 TIGD1Q96MW7 591 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 KLF16Q9BXK1 252 aaPredicted RBP17.2■□□□□ 0.34
CLTA-203ENST00000396603 GOLPH3LQ9H4A5 285 aa17.2■□□□□ 0.34
CLTA-203ENST00000396603 SDK1Q7Z5N4 2213 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 GFRA2O00451 464 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 SCAMP3O14828 347 aaKnown RBP17.19■□□□□ 0.34
CLTA-203ENST00000396603 BEST1O76090 585 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 PROS1P07225 676 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 CCDC130P13994 396 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 PIK3CAP42336 1068 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 ZNF132P52740 706 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 MAP3K7CLP57077 242 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 MCCD1P59942 119 aaPredicted RBP17.19■□□□□ 0.34
CLTA-203ENST00000396603 DLG4P78352 724 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 IRX4P78413 519 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 E2F5Q15329 346 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 SH3PXD2AQ5TCZ1 1133 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 EMC10Q5UCC4 262 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 SDE2Q6IQ49 451 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 CLEC20AQ6ZU45 233 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 TTC30AQ86WT1 665 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 TMEM25Q86YD3 366 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 FMR1NBQ8N0W7 255 aaPredicted RBP17.19■□□□□ 0.34
CLTA-203ENST00000396603 GABRG3Q99928 467 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 NT5C1AQ9BXI3 368 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 MBD1Q9UIS9 605 aaPredicted RBP17.19■□□□□ 0.34
CLTA-203ENST00000396603 PILRBQ9UKJ0 227 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 ZNF510Q9Y2H8 683 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 NUP205Q92621 2012 aa17.19■□□□□ 0.34
CLTA-203ENST00000396603 USP24Q9UPU5 2620 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 MAP1BP46821 2468 aaKnown RBP17.18■□□□□ 0.34
CLTA-203ENST00000396603 ANTXRLA6NF34 631 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 PATE3B3GLJ2 98 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 HHLA1C9JL84 531 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 NPC1O15118 1278 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 HLA-DRAP01903 254 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 HOXB2P14652 356 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms