RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 FBXO47Q5MNV8 452 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 RMDN2Q96LZ7 410 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 KLC4Q9NSK0 619 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 PIN4Q9Y237 131 aaKnown RBP17.24■□□□□ 0.35
TRIM39-205ENST00000396551 TEX264Q9Y6I9 313 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 AVILO75366 819 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 KRT4P19013 534 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 SPARCL1Q14515 664 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 SNX17Q15036 470 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 KLHL38Q2WGJ6 581 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 TREHO43280 583 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 PTPN9P43378 593 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 BST2Q10589 180 aaKnown RBP17.23■□□□□ 0.35
TRIM39-205ENST00000396551 DNAJC3Q13217 504 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 ZDHHC17Q8IUH5 632 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 CRYBG2Q8N1P7 616 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 ANKRD52Q8NB46 1076 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 ZNF670Q9BS34 389 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 RAB6BQ9NRW1 208 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 CPA4Q9UI42 421 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 KPNA7A9QM74 516 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 KBTBD13C9JR72 458 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 CHADO15335 359 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 TSHRP16473 764 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 RPL34P49207 117 aaKnown RBP17.23■□□□□ 0.35
TRIM39-205ENST00000396551 PPP6R3Q5H9R7 873 aaPredicted RBP17.23■□□□□ 0.35
TRIM39-205ENST00000396551 FAXCQ5TGI0 409 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 SLC26A9Q7LBE3 791 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 TLK2Q86UE8 772 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 SUGP1Q8IWZ8 645 aaKnown RBP17.23■□□□□ 0.35
TRIM39-205ENST00000396551 CENPIQ92674 756 aaPredicted RBP17.23■□□□□ 0.35
TRIM39-205ENST00000396551 PITPNM3Q9BZ71 974 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 PAK5Q9P286 719 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 BCLAF3A2AJT9 711 aaKnown RBP17.23■□□□□ 0.35
TRIM39-205ENST00000396551 LCP1P13796 627 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 L1CAMP32004 1257 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 PCBP1Q15365 356 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRIM39-205ENST00000396551 PDK4Q16654 411 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 MORN1Q5T089 497 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 RGS9BPQ6ZS82 235 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 VSIG1Q86XK7 387 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 ANKLE1Q8NAG6 615 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 NRDE2Q9H7Z3 1164 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 SLCO1B3Q9NPD5 702 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 MTMR10Q9NXD2 777 aa17.23■□□□□ 0.35
TRIM39-205ENST00000396551 ZNF865P0CJ78 1059 aaPredicted RBP17.22■□□□□ 0.35
TRIM39-205ENST00000396551 CYP2F1P24903 491 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 GNL1P36915 607 aaPredicted RBP17.22■□□□□ 0.35
TRIM39-205ENST00000396551 PSEN2P49810 448 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 BCAT1P54687 386 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 XKR4Q5GH76 650 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 CYB5D1Q6P9G0 228 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 FAM43BQ6ZT52 329 aaPredicted RBP17.22■□□□□ 0.35
TRIM39-205ENST00000396551 FITM2Q8N6M3 262 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 SSU72Q9NP77 194 aaKnown RBP17.22■□□□□ 0.35
TRIM39-205ENST00000396551 GDAP2Q9NXN4 497 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 ZNF638Q14966 1978 aaKnown RBP17.22■□□□□ 0.35
TRIM39-205ENST00000396551 TCRBV9S1A1TA0A576 114 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 HAS3O00219 553 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 AXLP30530 894 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 MSH2P43246 934 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 YWHAZP63104 245 aaKnown RBP17.22■□□□□ 0.35
TRIM39-205ENST00000396551 SLC10A2Q12908 348 aaPredicted RBP17.22■□□□□ 0.35
TRIM39-205ENST00000396551 LIMS2Q7Z4I7 341 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 ARRDC4Q8NCT1 418 aa17.22■□□□□ 0.35
TRIM39-205ENST00000396551 ZBED1O96006 694 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 TKTP29401 623 aaKnown RBP17.21■□□□□ 0.35
TRIM39-205ENST00000396551 NCALDP61601 193 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 CBLBQ13191 982 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 DPYSL2Q16555 572 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 LVRNQ6Q4G3 990 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 ECHDC2Q86YB7 292 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 SLC2A14Q8TDB8 520 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 KLF6Q99612 283 aaPredicted RBP17.21■□□□□ 0.35
TRIM39-205ENST00000396551 CD4P01730 458 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 C1QAP02745 245 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 KCNE1P15382 129 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 RNF43Q68DV7 783 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 OSTM1Q86WC4 334 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 CCDC185Q8N715 623 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 GRAMD1AQ96CP6 724 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 KCTD15Q96SI1 283 aaPredicted RBP17.21■□□□□ 0.35
TRIM39-205ENST00000396551 C12orf65Q9H3J6 166 aaKnown RBP17.21■□□□□ 0.35
TRIM39-205ENST00000396551 DHX35Q9H5Z1 703 aaKnown RBP17.21■□□□□ 0.35
TRIM39-205ENST00000396551 ETNK2Q9NVF9 386 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 PHTF1Q9UMS5 762 aa17.21■□□□□ 0.35
TRIM39-205ENST00000396551 CFAP69A5D8W1 941 aa17.21■□□□□ 0.34
TRIM39-205ENST00000396551 ZNF487B1APH4 448 aa17.21■□□□□ 0.34
TRIM39-205ENST00000396551 SNX16P57768 344 aa17.21■□□□□ 0.34
TRIM39-205ENST00000396551 GBE1Q04446 702 aa17.21■□□□□ 0.34
TRIM39-205ENST00000396551 MAP2K5Q13163 448 aa17.21■□□□□ 0.34
TRIM39-205ENST00000396551 CCL14Q16627 93 aa17.21■□□□□ 0.34
TRIM39-205ENST00000396551 CCDC110Q8TBZ0 833 aa17.21■□□□□ 0.34
TRIM39-205ENST00000396551 THOC1Q96FV9 657 aaKnown RBP17.21■□□□□ 0.34
TRIM39-205ENST00000396551 CYTH2Q99418 400 aa17.21■□□□□ 0.34
TRIM39-205ENST00000396551 PLAC1Q9HBJ0 212 aa17.21■□□□□ 0.34
TRIM39-205ENST00000396551 STARD13Q9Y3M8 1113 aa17.21■□□□□ 0.34
TRIM39-205ENST00000396551 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 GOLGA8RI6L899 631 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms