RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 NCOR2Q9Y618 2525 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 MTMR11A4FU01 709 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 CYP26A1O43174 497 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 LILRB5O75023 590 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 NFICP08651 508 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 ODC1P11926 461 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 GZMAP12544 262 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 NOP2P46087 812 aaKnown RBP18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 EPHB3P54753 998 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 HADHBP55084 474 aaKnown RBP18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 MFSD6LQ8IWD5 586 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 MMGT1Q8N4V1 131 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 ATAD1Q8NBU5 361 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 CTNNBL1Q8WYA6 563 aaPredicted RBP18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 PNKPQ96T60 521 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 SLITRK6Q9H5Y7 841 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 NDRG2Q9UN36 371 aaKnown RBP18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 PIAS3Q9Y6X2 628 aa18.4■□□□□ 0.54
TNFSF13-205ENST00000396545 A0A1W2PRU2 124 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 HEPACAM2A8MVW5 462 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 P4HA1P13674 534 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 CYP11B1P15538 503 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 PAX3P23760 479 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 RBP5P82980 135 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 C9orf57Q5W0N0 161 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 CC2D1AQ6P1N0 951 aaPredicted RBP18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 TSSK4Q6SA08 328 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 TMCO3Q6UWJ1 677 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 MAMSTRQ6ZN01 415 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 SYCE1Q8N0S2 351 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 TTC39CQ8N584 583 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 HNRNPLLQ8WVV9 542 aaKnown RBP18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 DDX1Q92499 740 aaKnown RBP18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 E2F7Q96AV8 911 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 RSPRY1Q96DX4 576 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 CALR3Q96L12 384 aaKnown RBP18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 SENP8Q96LD8 212 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 PCDHB18PQ96TA0 734 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 PI4K2AQ9BTU6 479 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 NIF3L1Q9GZT8 377 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 ABCB6Q9NP58 842 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 FAM53CQ9NYF3 392 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 CNTN6Q9UQ52 1028 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 SLC27A5Q9Y2P5 690 aa18.39■□□□□ 0.53
TNFSF13-205ENST00000396545 PIRO00625 290 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 RTN2O75298 545 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 CST3P01034 146 aaPredicted RBP18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 TDGF1P13385 188 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 CXCR5P32302 372 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 USP8P40818 1118 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 ALDH1A3P47895 512 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 FMO1Q01740 532 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 CDR2Q01850 454 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 ZNF699Q32M78 642 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 WDR93Q6P2C0 686 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 SLC47A2Q86VL8 602 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 ZNF677Q86XU0 584 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 TTC9BQ8N6N2 239 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 C1orf127Q8N9H9 656 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 OR10T2Q8NGX3 314 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 FAM3CQ92520 227 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 PSMG2Q969U7 264 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 FAM84AQ96KN4 292 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 TMEM209Q96SK2 561 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 IER2Q9BTL4 223 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 FAM126AQ9BYI3 521 aaPredicted RBP18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 THAP2Q9H0W7 228 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 DPP3Q9NY33 737 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 HSFX1Q9UBD0 423 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 ASB3Q9Y575 518 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 ANK1P16157 1881 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 TARSL2A2RTX5 802 aaKnown RBP18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 TMCO5BA8MYB1 307 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 ATP8B1O43520 1251 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 CYP11A1P05108 521 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 RHOXF2BP0C7M4 288 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 PAFAH1B1P43034 410 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 PDE6CP51160 858 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 MLLT6P55198 1093 aaPredicted RBP18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 MYL6P60660 151 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 FCHO2Q0JRZ9 810 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 STXBP5Q5T5C0 1151 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 GAREM2Q75VX8 874 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 RHOT2Q8IXI1 618 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 SPATA4Q8NEY3 305 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 SLC35G2Q8TBE7 412 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 ARHGEF26Q96DR7 871 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 RHOXF2Q9BQY4 288 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 XYLT2Q9H1B5 865 aa18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 APOBEC3GQ9HC16 384 aaKnown RBP18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 SEPT11Q9NVA2 429 aaKnown RBP18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 SMG5Q9UPR3 1016 aaKnown RBP18.38■□□□□ 0.53
TNFSF13-205ENST00000396545 SOAT2O75908 522 aa18.37■□□□□ 0.53
TNFSF13-205ENST00000396545 FTLP02792 175 aaPredicted RBP18.37■□□□□ 0.53
TNFSF13-205ENST00000396545 RPS6KA1Q15418 735 aa18.37■□□□□ 0.53
TNFSF13-205ENST00000396545 CFAP221Q4G0U5 840 aa18.37■□□□□ 0.53
TNFSF13-205ENST00000396545 ZNF667Q5HYK9 610 aa18.37■□□□□ 0.53
TNFSF13-205ENST00000396545 DNAJB7Q7Z6W7 309 aaPredicted RBP18.37■□□□□ 0.53
TNFSF13-205ENST00000396545 NT5DC3Q86UY8 548 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms