RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TBX18O95935 607 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 ERBB2P04626 1255 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 SKILP12757 684 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 TNFAIP3P21580 790 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 ATP5C1P36542 298 aaKnown RBP20.13■□□□□ 0.81
HOXA9-202ENST00000396345 CLEC16AQ2KHT3 1053 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 C10orf120Q5SQS8 335 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 BSPRYQ5W0U4 402 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 VITQ6UXI7 678 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 HFE2Q6ZVN8 426 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 MFSD6LQ8IWD5 586 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 ABCC13Q9NSE7 274 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 NUDT5Q9UKK9 219 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 CPQQ9Y646 472 aa20.13■□□□□ 0.81
HOXA9-202ENST00000396345 HELZP42694 1942 aaKnown RBP20.12■□□□□ 0.81
HOXA9-202ENST00000396345 LTFP02788 710 aa20.12■□□□□ 0.81
HOXA9-202ENST00000396345 PSMC3P17980 439 aa20.12■□□□□ 0.81
HOXA9-202ENST00000396345 OR6B2Q6IFH4 312 aa20.12■□□□□ 0.81
HOXA9-202ENST00000396345 KLHDC10Q6PID8 442 aa20.12■□□□□ 0.81
HOXA9-202ENST00000396345 RSRC2Q7L4I2 434 aaKnown RBP20.12■□□□□ 0.81
HOXA9-202ENST00000396345 DEPDC1BQ8WUY9 529 aa20.12■□□□□ 0.81
HOXA9-202ENST00000396345 C18orf8Q96DM3 657 aa20.12■□□□□ 0.81
HOXA9-202ENST00000396345 LRRC3BQ96PB8 259 aa20.12■□□□□ 0.81
HOXA9-202ENST00000396345 SYT11Q9BT88 431 aa20.12■□□□□ 0.81
HOXA9-202ENST00000396345 SMPD4Q9NXE4 827 aa20.12■□□□□ 0.81
HOXA9-202ENST00000396345 DNMT3LQ9UJW3 386 aa20.12■□□□□ 0.81
HOXA9-202ENST00000396345 BZW2Q9Y6E2 419 aaKnown RBP20.12■□□□□ 0.81
HOXA9-202ENST00000396345 SERPING1P05155 500 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 UNGP13051 313 aaPredicted RBP20.11■□□□□ 0.81
HOXA9-202ENST00000396345 NSFP46459 744 aaKnown RBP20.11■□□□□ 0.81
HOXA9-202ENST00000396345 GABRB2P47870 512 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 TBX2Q13207 712 aaPredicted RBP20.11■□□□□ 0.81
HOXA9-202ENST00000396345 GRM2Q14416 872 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 TDRD12Q587J7 1177 aaKnown RBP20.11■□□□□ 0.81
HOXA9-202ENST00000396345 FAM183BPQ6ZVS7 135 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 ZNF571Q7Z3V5 609 aaPredicted RBP20.11■□□□□ 0.81
HOXA9-202ENST00000396345 YAF2Q8IY57 180 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 TTC16Q8NEE8 873 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 OR8K1Q8NGG5 319 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 SLC30A5Q8TAD4 765 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 BPIFB1Q8TDL5 484 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 SH3RF2Q8TEC5 729 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 RNF139Q8WU17 664 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 EDEM1Q92611 657 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 FAM149B1Q96BN6 582 aa20.11■□□□□ 0.81
HOXA9-202ENST00000396345 TRMT61BQ9BVS5 477 aaKnown RBP20.11■□□□□ 0.81
HOXA9-202ENST00000396345 OLA1Q9NTK5 396 aaKnown RBP20.11■□□□□ 0.81
HOXA9-202ENST00000396345 LEFTY2O00292 366 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 MDM4O15151 490 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 NARSO43776 548 aaKnown RBP20.1■□□□□ 0.81
HOXA9-202ENST00000396345 TCF3P15923 654 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 ZXDBP98169 803 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 SLC6A3Q01959 620 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 CENPCQ03188 943 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 EFEMP1Q12805 493 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 ZNF77Q15935 545 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 TSR1Q2NL82 804 aaKnown RBP20.1■□□□□ 0.81
HOXA9-202ENST00000396345 EFHC1Q5JVL4 640 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 HGSNATQ68CP4 663 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 TOGARAM2Q6ZUX3 1019 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 DDX42Q86XP3 938 aaKnown RBP eCLIP20.1■□□□□ 0.81
HOXA9-202ENST00000396345 ZDHHC17Q8IUH5 632 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 DNAJC7Q99615 494 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 TRIM62Q9BVG3 475 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 GKN1Q9NS71 199 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 THG1LQ9NWX6 298 aaKnown RBP20.1■□□□□ 0.81
HOXA9-202ENST00000396345 RASAL2Q9UJF2 1139 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 DUSP12Q9UNI6 340 aa20.1■□□□□ 0.81
HOXA9-202ENST00000396345 AKR1B15C9JRZ8 316 aaPredicted RBP20.09■□□□□ 0.81
HOXA9-202ENST00000396345 MFAP3LO75121 409 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 GLI1P08151 1106 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 SRFP11831 508 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 MMP8P22894 467 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 GDI1P31150 447 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 HNRNPH3P31942 346 aaKnown RBP20.09■□□□□ 0.81
HOXA9-202ENST00000396345 ADKP55263 362 aaKnown RBP20.09■□□□□ 0.81
HOXA9-202ENST00000396345 YWHAZP63104 245 aaKnown RBP20.09■□□□□ 0.81
HOXA9-202ENST00000396345 GOLGA8FQ08AF8 430 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 GOLGA8DPQ0D2H9 430 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 FCHO2Q0JRZ9 810 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 USP4Q13107 963 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 C2CD6Q53TS8 623 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 OLFML1Q6UWY5 402 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 MMS22LQ6ZRQ5 1243 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 XYLT1Q86Y38 959 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 MIB1Q86YT6 1006 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 CNGA4Q8IV77 575 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 UBALD2Q8IYN6 164 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 OLIG1Q8TAK6 271 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 RIN3Q8TB24 985 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 KHSRPQ92945 711 aaKnown RBP eCLIP20.09■□□□□ 0.81
HOXA9-202ENST00000396345 PIWIL1Q96J94 861 aaKnown RBP20.09■□□□□ 0.81
HOXA9-202ENST00000396345 ZFRQ96KR1 1074 aaKnown RBP20.09■□□□□ 0.81
HOXA9-202ENST00000396345 KLF16Q9BXK1 252 aaPredicted RBP20.09■□□□□ 0.81
HOXA9-202ENST00000396345 SMOC2Q9H3U7 446 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 POPDC2Q9HBU9 364 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 ZNHIT6Q9NWK9 470 aaKnown RBP20.09■□□□□ 0.81
HOXA9-202ENST00000396345 ASNSD1Q9NWL6 643 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 MARCH2Q9P0N8 246 aa20.09■□□□□ 0.81
HOXA9-202ENST00000396345 CFAP97Q9P2B7 532 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms