RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 LRRC19Q9H756 370 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 COPS7BQ9H9Q2 264 aaPredicted RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 ZFP57Q9NU63 452 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 SPTLC3Q9NUV7 552 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 SMPD3Q9NY59 655 aaPredicted RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 DOLKQ9UPQ8 538 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 MFSD2BA6NFX1 497 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 FAM227AF5H4B4 570 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 F8W810 466 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 G3V3G9 751 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 C6orf229H3BNL8 230 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 GGPS1O95749 300 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ALDH2P05091 517 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ADSSP30520 456 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 HSPA7P48741 367 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 LIG3P49916 1009 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 CAMK2GQ13555 558 aaPredicted RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 CDONQ4KMG0 1287 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 VARS2Q5ST30 1063 aaKnown RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 TUBA3EQ6PEY2 450 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 CHSY3Q70JA7 882 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 SLC43A2Q8N370 569 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 TCAIMQ8N3R3 496 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 SPATA4Q8NEY3 305 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 LRRC8CQ8TDW0 803 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 PGBD1Q96JS3 809 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ZNF358Q9NW07 568 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 TMOD3Q9NYL9 352 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 STK38LQ9Y2H1 464 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 FAM169AQ9Y6X4 670 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 IQANK1A0A1B0GTG1 560 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 H3BNC9 293 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 B3GALT2O43825 422 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 FRAT2O75474 233 aaPredicted RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 PCDH8O95206 1070 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 IL1AP01583 271 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ALOX5P09917 674 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 GNAT1P11488 350 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 GLRA2P23416 452 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 AKT1P31749 480 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 CCR9P51686 369 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 EPHA4P54764 986 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 YWHAZP63104 245 aaKnown RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 GRIK4Q16099 956 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 PCGF3Q3KNV8 242 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 PABPC1LQ4VXU2 614 aaKnown RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 C12orf60Q5U649 245 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 SIGIRRQ6IA17 410 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 DSG4Q86SJ6 1040 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ASPGQ86U10 573 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 AKAP14Q86UN6 197 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 LDHDQ86WU2 507 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 MRPL43Q8N983 215 aaKnown RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 GLIS3Q8NEA6 775 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 AHCYL2Q96HN2 611 aaKnown RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 ERVMER34-1Q9H9K5 563 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 EMC7Q9NPA0 242 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 C11orf16Q9NQ32 467 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ARHGEF38Q9NXL2 777 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 CAPN11Q9UMQ6 739 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 SCAF8Q9UPN6 1271 aaKnown RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 EPRSP07814 1512 aaKnown RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 A0A1B0GVG6 124 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 A0A1W2PPW3 197 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 AQP12BA6NM10 295 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 A8MX80 341 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 HNRNPRO43390 633 aaKnown RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 TNFRSF6BO95407 300 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 VNN2O95498 520 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 PTPREP23469 700 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 CHMP24386 653 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 PCSK1P29120 753 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ICAM3P32942 547 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 THOP1P52888 689 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 PRRX1P54821 245 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ASPHQ12797 758 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 MAPK7Q13164 816 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 LRRC32Q14392 662 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 SLC35G1Q2M3R5 365 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 RNF220Q5VTB9 566 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ACAD10Q6JQN1 1059 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 UNC13DQ70J99 1090 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 TTC6Q86TZ1 520 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 SLC51AQ86UW1 340 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 SLC51BQ86UW2 128 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 TPRA1Q86W33 373 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ALDH16A1Q8IZ83 802 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 TNS4Q8IZW8 715 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 ABHD1Q96SE0 405 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 TBC1D10AQ9BXI6 508 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 FRMD8Q9BZ67 464 aaPredicted RBP4.43□□□□□ -1.7
HERC4-204ENST00000395198 FAM204AQ9H8W3 233 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 KCNK13Q9HB14 408 aa4.43□□□□□ -1.7
HERC4-204ENST00000395198 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.43□□□□□ -1.7
HERC4-204ENST00000395198 FANCAO15360 1455 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 A8MXE2 369 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 PCDH17O14917 1159 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 ARHGAP6O43182 974 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 ADAMTS2O95450 1211 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 PLCG1P19174 1290 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms