RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 SLITRK1Q96PX8 696 aa13.71□□□□□ -0.21
VPS26A-203ENST00000395098 HEMGNQ9BXL5 484 aa13.71□□□□□ -0.21
VPS26A-203ENST00000395098 MAGEB5Q9BZ81 275 aa13.71□□□□□ -0.21
VPS26A-203ENST00000395098 ZBP1Q9H171 429 aa13.71□□□□□ -0.21
VPS26A-203ENST00000395098 NMUR1Q9HB89 426 aa13.71□□□□□ -0.21
VPS26A-203ENST00000395098 GPATCH2LQ9NWQ4 482 aa13.71□□□□□ -0.21
VPS26A-203ENST00000395098 LAMA3Q16787 3333 aa13.71□□□□□ -0.21
VPS26A-203ENST00000395098 SYNJ2BP-COX16A0A087WUM0 186 aa13.71□□□□□ -0.22
VPS26A-203ENST00000395098 LRRD1A4D1F6 860 aa13.71□□□□□ -0.22
VPS26A-203ENST00000395098 LINC01553A4QN01 128 aa13.71□□□□□ -0.22
VPS26A-203ENST00000395098 SART1O43290 800 aaKnown RBP13.71□□□□□ -0.22
VPS26A-203ENST00000395098 RALAP11233 206 aa13.71□□□□□ -0.22
VPS26A-203ENST00000395098 KRT17Q04695 432 aa13.71□□□□□ -0.22
VPS26A-203ENST00000395098 SHHQ15465 462 aa13.71□□□□□ -0.22
VPS26A-203ENST00000395098 SIX1Q15475 284 aaPredicted RBP13.71□□□□□ -0.22
VPS26A-203ENST00000395098 ZNF461Q8TAF7 563 aa13.71□□□□□ -0.22
VPS26A-203ENST00000395098 C2orf15Q8WU43 125 aaKnown RBP13.71□□□□□ -0.22
VPS26A-203ENST00000395098 C17orf80Q9BSJ5 609 aa13.71□□□□□ -0.22
VPS26A-203ENST00000395098 ALG13Q9NP73 1137 aaKnown RBP13.71□□□□□ -0.22
VPS26A-203ENST00000395098 OSER1Q9NX31 292 aa13.71□□□□□ -0.22
VPS26A-203ENST00000395098 COX16Q9P0S2 106 aa13.71□□□□□ -0.22
VPS26A-203ENST00000395098 CAPN9O14815 690 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 PRPSAP2O60256 369 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 CSPG5O95196 566 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 KRT7P08729 469 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 RHOXF2BP0C7M4 288 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 KRT10P13645 584 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 BMPR1AP36894 532 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 SMC1AQ14683 1233 aaKnown RBP13.7□□□□□ -0.22
VPS26A-203ENST00000395098 CA9Q16790 459 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 RCOR2Q8IZ40 523 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 MMGT1Q8N4V1 131 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 CCDC185Q8N715 623 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 GIPC2Q8TF65 315 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 RHOXF2Q9BQY4 288 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 MTIF3Q9H2K0 278 aaKnown RBP13.7□□□□□ -0.22
VPS26A-203ENST00000395098 MRPL17Q9NRX2 175 aaKnown RBP13.7□□□□□ -0.22
VPS26A-203ENST00000395098 IL37Q9NZH6 218 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 CARNS1A5YM72 827 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 M0QYT0 321 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 FSCN2O14926 492 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 TEX28O15482 410 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 CTNNB1P35222 781 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 YWHAGP61981 247 aaKnown RBP eCLIP13.7□□□□□ -0.22
VPS26A-203ENST00000395098 ZC3H12AQ5D1E8 599 aaKnown RBP13.7□□□□□ -0.22
VPS26A-203ENST00000395098 SPOCD1Q6ZMY3 1216 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 DENND5BQ6ZUT9 1274 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 STRADAQ7RTN6 431 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 FAM131BQ86XD5 332 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 KLHL7Q8IXQ5 586 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 CMASQ8NFW8 434 aaPredicted RBP13.7□□□□□ -0.22
VPS26A-203ENST00000395098 SLC7A14Q8TBB6 771 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 KRT12Q99456 494 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 DDX47Q9H0S4 455 aaKnown RBP13.7□□□□□ -0.22
VPS26A-203ENST00000395098 ANKZF1Q9H8Y5 726 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 TMPRSS4Q9NRS4 437 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 PIGVQ9NUD9 493 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 DDX56Q9NY93 547 aaKnown RBP13.7□□□□□ -0.22
VPS26A-203ENST00000395098 AFF4Q9UHB7 1163 aaKnown RBP13.7□□□□□ -0.22
VPS26A-203ENST00000395098 MTUS1Q9ULD2 1270 aa13.7□□□□□ -0.22
VPS26A-203ENST00000395098 COL4A4P53420 1690 aaPredicted RBP13.69□□□□□ -0.22
VPS26A-203ENST00000395098 A0A1W2PQH9 124 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 ENDOD1O94919 500 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 CTSAP10619 480 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 ATF2P15336 505 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 KDELR1P24390 212 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 DNAJB1P25685 340 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 CDKN2BP42772 138 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 NME3Q13232 169 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 RAB33AQ14088 237 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 PRELID2Q8N945 189 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 HDAC7Q8WUI4 952 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 HINFPQ9BQA5 517 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 LRRC1Q9BTT6 524 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 SNRNP25Q9BV90 132 aaKnown RBP13.69□□□□□ -0.22
VPS26A-203ENST00000395098 OSBPL8Q9BZF1 889 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 PLEKHA4Q9H4M7 779 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.69□□□□□ -0.22
VPS26A-203ENST00000395098 GMIPQ9P107 970 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 NUDT5Q9UKK9 219 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 STAP1Q9ULZ2 295 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 SCML2Q9UQR0 700 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 CNPP09543 421 aaKnown RBP13.69□□□□□ -0.22
VPS26A-203ENST00000395098 ARSEP51690 589 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 ERVFC1P60507 584 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 KLF1Q13351 362 aaPredicted RBP13.69□□□□□ -0.22
VPS26A-203ENST00000395098 KAZNQ674X7 775 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 RBM41Q96IZ5 413 aaKnown RBP13.69□□□□□ -0.22
VPS26A-203ENST00000395098 SPATA17Q96L03 361 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 PLVAPQ9BX97 442 aa13.69□□□□□ -0.22
VPS26A-203ENST00000395098 CHD7Q9P2D1 2997 aa13.68□□□□□ -0.22
VPS26A-203ENST00000395098 FAM92AA1XBS5 289 aa13.68□□□□□ -0.22
VPS26A-203ENST00000395098 CA8P35219 290 aa13.68□□□□□ -0.22
VPS26A-203ENST00000395098 KCTD6Q8NC69 237 aa13.68□□□□□ -0.22
VPS26A-203ENST00000395098 NAP1L3Q99457 506 aaPredicted RBP13.68□□□□□ -0.22
VPS26A-203ENST00000395098 CYP4F11Q9HBI6 524 aa13.68□□□□□ -0.22
VPS26A-203ENST00000395098 RXFP1Q9HBX9 757 aa13.68□□□□□ -0.22
VPS26A-203ENST00000395098 WDR6Q9NNW5 1121 aaKnown RBP13.68□□□□□ -0.22
VPS26A-203ENST00000395098 ANLNQ9NQW6 1124 aa13.68□□□□□ -0.22
VPS26A-203ENST00000395098 R3HDM2Q9Y2K5 976 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms