RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 FBXO16Q8IX29 292 aaPredicted RBP21.44■■□□□ 1.02
CLK3-202ENST00000395066 CCDC110Q8TBZ0 833 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 NSL1Q96IY1 281 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 FZD8Q9H461 694 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 USP29Q9HBJ7 922 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 NGRNQ9NPE2 291 aaKnown RBP21.44■■□□□ 1.02
CLK3-202ENST00000395066 ASNSD1Q9NWL6 643 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 DLGAP2Q9P1A6 1054 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 MARCOQ9UEW3 520 aaPredicted RBP21.44■■□□□ 1.02
CLK3-202ENST00000395066 TTLL3Q9Y4R7 772 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 GPD1P21695 349 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 SP100P23497 879 aaPredicted RBP21.44■■□□□ 1.02
CLK3-202ENST00000395066 ZNF143P52747 638 aaPredicted RBP21.44■■□□□ 1.02
CLK3-202ENST00000395066 KRT81Q14533 505 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 KPNB1Q14974 876 aaKnown RBP21.44■■□□□ 1.02
CLK3-202ENST00000395066 ACSBG2Q5FVE4 666 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 TEKT4Q8WW24 435 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 SKA1Q96BD8 255 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 ALKBH8Q96BT7 664 aaKnown RBP21.44■■□□□ 1.02
CLK3-202ENST00000395066 LRCH1Q9Y2L9 728 aa21.44■■□□□ 1.02
CLK3-202ENST00000395066 KRT36O76013 467 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 C1QAP02745 245 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 KITP10721 976 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 NRG4Q8WWG1 115 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 FRMD8P1Q9BZ68 369 aaPredicted RBP21.43■■□□□ 1.02
CLK3-202ENST00000395066 VCXQ9H320 206 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 WDR35Q9P2L0 1181 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 ASB3Q9Y575 518 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 IGKV6-21A0A0C4DH24 114 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 MAP3K13O43283 966 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 IL4RP24394 825 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 NDST1P52848 882 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 CDK16Q00536 496 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 PLD5Q8N7P1 536 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 FBXO27Q8NI29 283 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 UCMAQ8WVF2 138 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 MCUR1Q96AQ8 359 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 SPATA33Q96N06 139 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 PHACTR1Q9C0D0 580 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 NMUR2Q9GZQ4 415 aa21.43■■□□□ 1.02
CLK3-202ENST00000395066 C2CD4BA6NLJ0 364 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 COPEO14579 308 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 PRPSAP2O60256 369 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 GNAT1P11488 350 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 TFE3P19532 575 aaPredicted RBP21.42■■□□□ 1.02
CLK3-202ENST00000395066 OCRLQ01968 901 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 SLC18A2Q05940 514 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 VGLL4Q14135 290 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 PPP6R3Q5H9R7 873 aaPredicted RBP21.42■■□□□ 1.02
CLK3-202ENST00000395066 GJC2Q5T442 439 aaPredicted RBP21.42■■□□□ 1.02
CLK3-202ENST00000395066 AP1ARQ63HQ0 302 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 CXorf38Q8TB03 319 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 DTX3LQ8TDB6 740 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 WDR60Q8WVS4 1066 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 SCG3Q8WXD2 468 aaKnown RBP21.42■■□□□ 1.02
CLK3-202ENST00000395066 RNF157Q96PX1 679 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 SPATC1LQ9H0A9 340 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 PAPOLBQ9NRJ5 636 aaKnown RBP21.42■■□□□ 1.02
CLK3-202ENST00000395066 CNTN3Q9P232 1028 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 ZC3H7BQ9UGR2 993 aaKnown RBP21.42■■□□□ 1.02
CLK3-202ENST00000395066 TSPAN16Q9UKR8 245 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 CAPN9O14815 690 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 SKIP12755 728 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 PAPOLAP51003 745 aaKnown RBP21.42■■□□□ 1.02
CLK3-202ENST00000395066 SLC34A1Q06495 639 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 TRMT10BQ6PF06 316 aaKnown RBP21.42■■□□□ 1.02
CLK3-202ENST00000395066 GADL1Q6ZQY3 521 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 CAND1Q86VP6 1230 aaKnown RBP21.42■■□□□ 1.02
CLK3-202ENST00000395066 VPS52Q8N1B4 723 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 MPP5Q8N3R9 675 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 PQLC3Q8N755 202 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 FAM167AQ96KS9 214 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 LPIN3Q9BQK8 851 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 IQCGQ9H095 443 aaKnown RBP21.42■■□□□ 1.02
CLK3-202ENST00000395066 C2orf40Q9H1Z8 148 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 CXCL16Q9H2A7 254 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 RNPEPQ9H4A4 650 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 RNF19AQ9NV58 838 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 MCM3APO60318 1980 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 DNAJC6O75061 913 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 PSMG1O95456 288 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 IRX4P78413 519 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 MRPS5P82675 430 aaKnown RBP21.42■■□□□ 1.02
CLK3-202ENST00000395066 RCN2Q14257 317 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 LRRC74BQ6ZQY2 392 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 NETO2Q8NC67 525 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 HPDLQ96IR7 371 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 ACAP3Q96P50 834 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 POPDC2Q9HBU9 364 aa21.42■■□□□ 1.02
CLK3-202ENST00000395066 SOCS7O14512 581 aa21.41■■□□□ 1.02
CLK3-202ENST00000395066 FCHO1O14526 889 aa21.41■■□□□ 1.02
CLK3-202ENST00000395066 ENDOD1O94919 500 aa21.41■■□□□ 1.02
CLK3-202ENST00000395066 CSH1P0DML2 217 aa21.41■■□□□ 1.02
CLK3-202ENST00000395066 CSH2P0DML3 217 aa21.41■■□□□ 1.02
CLK3-202ENST00000395066 STIP1P31948 543 aaKnown RBP21.41■■□□□ 1.02
CLK3-202ENST00000395066 GRIA1P42261 906 aa21.41■■□□□ 1.02
CLK3-202ENST00000395066 GABRB2P47870 512 aa21.41■■□□□ 1.02
CLK3-202ENST00000395066 ATXN1P54253 815 aaKnown RBP21.41■■□□□ 1.02
CLK3-202ENST00000395066 CCDC14Q49A88 953 aa21.41■■□□□ 1.02
CLK3-202ENST00000395066 HSF5Q4G112 596 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms