RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PTPN20Q4JDL3 420 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 BSPRYQ5W0U4 402 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 BTBD8Q5XKL5 378 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 E4F1Q66K89 784 aaPredicted RBP20.88■□□□□ 0.93
SNCA-203ENST00000394986 TMEM110Q86TL2 294 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 MIB1Q86YT6 1006 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 SCML4Q8N228 414 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 PPP1R13BQ96KQ4 1090 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 RASAL2Q9UJF2 1139 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 CEP83Q9Y592 693 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 WNT6Q9Y6F9 365 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 TECTAO75443 2155 aa20.88■□□□□ 0.93
SNCA-203ENST00000394986 FBXO21O94952 628 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 ERBB2P04626 1255 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 ARSAP15289 507 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 CDR2Q01850 454 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 EFEMP1Q12805 493 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 ARHGAP29Q52LW3 1261 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 NAA35Q5VZE5 725 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 CC2D1AQ6P1N0 951 aaPredicted RBP20.87■□□□□ 0.93
SNCA-203ENST00000394986 RSRC2Q7L4I2 434 aaKnown RBP20.87■□□□□ 0.93
SNCA-203ENST00000394986 TMEM35BQ8NCS4 154 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 IRGQQ8WZA9 623 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 IRF7Q92985 503 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 ARHGEF3Q9NR81 526 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 THG1LQ9NWX6 298 aaKnown RBP20.87■□□□□ 0.93
SNCA-203ENST00000394986 GTSE1Q9NYZ3 720 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 WNT16Q9UBV4 365 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 AP5Z1O43299 807 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 LTFP02788 710 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 TCF3P15923 654 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 CDH5P33151 784 aaPredicted RBP20.87■□□□□ 0.93
SNCA-203ENST00000394986 NOMO3P69849 1222 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 PFKPQ01813 784 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 SLC44A4Q53GD3 710 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 C2CD6Q53TS8 623 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 ZNF677Q86XU0 584 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 CPLX3Q8WVH0 158 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 CPA5Q8WXQ8 436 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 NOX5Q96PH1 765 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 PCDHB18PQ96TA0 734 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 FAM83CQ9BQN1 747 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 KLF16Q9BXK1 252 aaPredicted RBP20.87■□□□□ 0.93
SNCA-203ENST00000394986 LINC00597Q9H2U6 94 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 EBF3Q9H4W6 596 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 HPS4Q9NQG7 708 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 DNMT3LQ9UJW3 386 aa20.87■□□□□ 0.93
SNCA-203ENST00000394986 FERP16591 822 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 SOX9P48436 509 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 TAF5Q15542 800 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 FIGNQ5HY92 759 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 KLHDC10Q6PID8 442 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 FAM183BPQ6ZVS7 135 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 IRF2BP2Q7Z5L9 587 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 OSCP1Q8WVF1 389 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 DNASE1L2Q92874 299 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 FAM149B1Q96BN6 582 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 SYNCQ9H7C4 482 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 ABCC13Q9NSE7 274 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 MYO6Q9UM54 1294 aa20.86■□□□□ 0.93
SNCA-203ENST00000394986 CBFA2T2O43439 604 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 LSM8O95777 96 aaKnown RBP20.85■□□□□ 0.93
SNCA-203ENST00000394986 FYNP06241 537 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 TPM3P06753 285 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 HMBSP08397 361 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 MLF2Q15773 248 aaPredicted RBP20.85■□□□□ 0.93
SNCA-203ENST00000394986 ASIC2Q16515 512 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 OR6B2Q6IFH4 312 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 TPRG1Q6ZUI0 275 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 TADA2BQ86TJ2 420 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 ZNF276Q8N554 614 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 CSGALNACT1Q8TDX6 532 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 IPO4Q8TEX9 1081 aaKnown RBP20.85■□□□□ 0.93
SNCA-203ENST00000394986 CDK5RAP1Q96SZ6 601 aaKnown RBP20.85■□□□□ 0.93
SNCA-203ENST00000394986 SEPT11Q9NVA2 429 aaKnown RBP20.85■□□□□ 0.93
SNCA-203ENST00000394986 DUS2Q9NX74 493 aaKnown RBP20.85■□□□□ 0.93
SNCA-203ENST00000394986 MARCH2Q9P0N8 246 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 SFMBT1Q9UHJ3 866 aa20.85■□□□□ 0.93
SNCA-203ENST00000394986 OTOL1A6NHN0 477 aaPredicted RBP20.84■□□□□ 0.93
SNCA-203ENST00000394986 SART1O43290 800 aaKnown RBP20.84■□□□□ 0.93
SNCA-203ENST00000394986 CYP1A1P04798 512 aaPredicted RBP20.84■□□□□ 0.93
SNCA-203ENST00000394986 GYPCP04921 128 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 COL4A2P08572 1712 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 CD72P21854 359 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 IFNAR2P48551 515 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 SFMBT2Q5VUG0 894 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 DDX42Q86XP3 938 aaKnown RBP eCLIP20.84■□□□□ 0.93
SNCA-203ENST00000394986 OLIG1Q8TAK6 271 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 RNF139Q8WU17 664 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 GOLGA1Q92805 767 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 PBXIP1Q96AQ6 731 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 AGPAT1Q99943 283 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 NUP58Q9BVL2 599 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 EDEM3Q9BZQ6 932 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 SH3BP1Q9Y3L3 701 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 PIAS3Q9Y6X2 628 aa20.84■□□□□ 0.93
SNCA-203ENST00000394986 HELZP42694 1942 aaKnown RBP20.84■□□□□ 0.93
SNCA-203ENST00000394986 SLC12A8A0AV02 714 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 MSI1O43347 362 aaKnown RBP20.83■□□□□ 0.93
SNCA-203ENST00000394986 GREM1O60565 184 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms