RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ABHD15Q6UXT9 468 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 TNS4Q8IZW8 715 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 OLIG1Q8TAK6 271 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 MOCOSQ96EN8 888 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 LRMDAQ9H2I8 198 aa13.71□□□□□ -0.21
NFKB1-202ENST00000394820 TSR3Q9UJK0 312 aaKnown RBP13.71□□□□□ -0.21
NFKB1-202ENST00000394820 LYPLA2O95372 231 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 GNL1P36915 607 aaPredicted RBP13.71□□□□□ -0.22
NFKB1-202ENST00000394820 AVPR1AP37288 418 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 ITGA9Q13797 1035 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 VGLL4Q14135 290 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 MORF4L2Q15014 288 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 RALGPS1Q5JS13 557 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 CATSPERGQ6ZRH7 1159 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 IFNEQ86WN2 208 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 UNC5BQ8IZJ1 945 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 RIBC1Q8N443 379 aaPredicted RBP13.71□□□□□ -0.22
NFKB1-202ENST00000394820 TMC2Q8TDI7 906 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 TRPV6Q9H1D0 765 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.22
NFKB1-202ENST00000394820 GPC4O75487 556 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 NME5P56597 212 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 CDK16Q00536 496 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 MCL1Q07820 350 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 TMEM63BQ5T3F8 832 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 SH3PXD2AQ5TCZ1 1133 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 MTMR14Q8NCE2 650 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 USP33Q8TEY7 942 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 SH3TC2Q8TF17 1288 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 MFSD14AQ96MC6 490 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 SPATA33Q96N06 139 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 EBF4Q9BQW3 602 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 TUBB6Q9BUF5 446 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 FAM49AQ9H0Q0 323 aaPredicted RBP13.7□□□□□ -0.22
NFKB1-202ENST00000394820 PTPRHQ9HD43 1115 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 GRID1Q9ULK0 1009 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 NENFQ9UMX5 172 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 MYO18AQ92614 2054 aaKnown RBP13.7□□□□□ -0.22
NFKB1-202ENST00000394820 RBL1P28749 1068 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 SLC45A4Q5BKX6 768 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 GLRA4Q5JXX5 417 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 DENND1BQ6P3S1 775 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 TLDC1Q6P9B6 456 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 PID1Q7Z2X4 250 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 ANKS1BQ7Z6G8 1248 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 RNF169Q8NCN4 708 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 FBXO27Q8NI29 283 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 SERAC1Q96JX3 654 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 TIPINQ9BVW5 301 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 GTSE1Q9NYZ3 720 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 MYOCOSA0A1B0GUC4 107 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 TCRBV9S1A1TA0A576 114 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 B4GALT5O43286 388 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 PSTPIP1O43586 416 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 PRKCBP05771 671 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 DBN1Q16643 649 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 HSDL1Q3SXM5 330 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 UTS2BQ765I0 119 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 PSPC1Q8WXF1 523 aaKnown RBP13.7□□□□□ -0.22
NFKB1-202ENST00000394820 DCPSQ96C86 337 aaKnown RBP13.7□□□□□ -0.22
NFKB1-202ENST00000394820 MPP4Q96JB8 637 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 NUF2Q9BZD4 464 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 GRIP2Q9C0E4 1043 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 SEMA6AQ9H2E6 1030 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 CAAP1Q9H8G2 361 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 BTBD7Q9P203 1132 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 PGAP2Q9UHJ9 254 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 SIPA1L1O43166 1804 aa13.7□□□□□ -0.22
NFKB1-202ENST00000394820 GARTP22102 1010 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 TPD52P55327 224 aaPredicted RBP13.69□□□□□ -0.22
NFKB1-202ENST00000394820 CAPSQ13938 189 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 PDCD2Q16342 344 aaPredicted RBP13.69□□□□□ -0.22
NFKB1-202ENST00000394820 PLEKHG4Q58EX7 1191 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 FAM160B1Q5W0V3 765 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 DIS3LQ8TF46 1054 aaKnown RBP13.69□□□□□ -0.22
NFKB1-202ENST00000394820 KLRG1Q96E93 195 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 PGLYRP2Q96PD5 576 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 HAPLN2Q9GZV7 340 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 RPF1Q9H9Y2 349 aaKnown RBP13.69□□□□□ -0.22
NFKB1-202ENST00000394820 A0A0B4J269 797 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 C19orf81C9J6K1 198 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 IRF6O14896 467 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 ACADSP16219 412 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 MIPP30301 263 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 NOMO3P69849 1222 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 MRPS22P82650 360 aaKnown RBP13.69□□□□□ -0.22
NFKB1-202ENST00000394820 NRF1Q16656 503 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 KCTD21Q4G0X4 260 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 WASHC2DQ5SRD0 308 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 HEATR6Q6AI08 1181 aaKnown RBP13.69□□□□□ -0.22
NFKB1-202ENST00000394820 SLFN12LQ6IEE8 588 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 ENOSF1Q7L5Y1 443 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 APOBEC3FQ8IUX4 373 aaKnown RBP13.69□□□□□ -0.22
NFKB1-202ENST00000394820 C12orf56Q8IXR9 622 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 SAMD3Q8N6K7 520 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 SNX31Q8N9S9 440 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 C20orf96Q9NUD7 363 aaPredicted RBP13.69□□□□□ -0.22
NFKB1-202ENST00000394820 KLHL8Q9P2G9 620 aaPredicted RBP13.69□□□□□ -0.22
NFKB1-202ENST00000394820 ARHGAP26Q9UNA1 814 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 AFG3L2Q9Y4W6 797 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms