RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 SSTR1P30872 391 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 L1CAMP32004 1257 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 RPL34P49207 117 aaKnown RBP15.7■□□□□ 0.1
GPC3-202ENST00000394299 GPX6P59796 221 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 ROR1Q01973 937 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 SLC10A2Q12908 348 aaPredicted RBP15.7■□□□□ 0.1
GPC3-202ENST00000394299 ERMARDQ5T6L9 678 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 CLEC20AQ6ZU45 233 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 RSPH3Q86UC2 560 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 ATXN2LQ8WWM7 1075 aaKnown RBP15.7■□□□□ 0.1
GPC3-202ENST00000394299 HNRNPABQ99729 332 aaKnown RBP15.7■□□□□ 0.1
GPC3-202ENST00000394299 UPF3AQ9H1J1 476 aaKnown RBP15.7■□□□□ 0.1
GPC3-202ENST00000394299 ETNK2Q9NVF9 386 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 MTMR10Q9NXD2 777 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 ALOX15BO15296 676 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 FAM107AO95990 144 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 BCAR1P56945 870 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 GBE1Q04446 702 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 DCAF6Q58WW2 860 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 SYPL2Q5VXT5 272 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 VSTM1Q6UX27 236 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 SRLQ86TD4 932 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 MAP7D3Q8IWC1 876 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 PPIL6Q8IXY8 311 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 CENPIQ92674 756 aaPredicted RBP15.7■□□□□ 0.1
GPC3-202ENST00000394299 CNOT10Q9H9A5 744 aaKnown RBP15.7■□□□□ 0.1
GPC3-202ENST00000394299 KCNK9Q9NPC2 374 aa15.7■□□□□ 0.1
GPC3-202ENST00000394299 F8W810 466 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 XPO1O14980 1071 aaKnown RBP15.69■□□□□ 0.1
GPC3-202ENST00000394299 KCNN4O15554 427 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 AVILO75366 819 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 CYP2F1P24903 491 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 TFDP2Q14188 446 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 PDK2Q15119 407 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 GPRIN1Q7Z2K8 1008 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 ZDHHC17Q8IUH5 632 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 ANKRD42Q8N9B4 389 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 HSFY1Q96LI6 401 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 KCTD15Q96SI1 283 aaPredicted RBP15.69■□□□□ 0.1
GPC3-202ENST00000394299 INTS9Q9NV88 658 aaKnown RBP15.69■□□□□ 0.1
GPC3-202ENST00000394299 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.69■□□□□ 0.1
GPC3-202ENST00000394299 XPO7Q9UIA9 1087 aaKnown RBP15.69■□□□□ 0.1
GPC3-202ENST00000394299 SHOC2Q9UQ13 582 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 TMEM120BA0PK00 339 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 NRP1O14786 923 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 APOL1O14791 398 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 TRIM66O15016 1216 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 NPR3P17342 541 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 AMPD1P23109 780 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 PTPN9P43378 593 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 EFTUD2Q15029 972 aaKnown RBP eCLIP15.69■□□□□ 0.15e-10■■■□□ 17.1
GPC3-202ENST00000394299 TMED2Q15363 201 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 HIF1AQ16665 826 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 BBS9Q3SYG4 887 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 TIGD5Q53EQ6 642 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 DSTYKQ6XUX3 929 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 CENPUQ71F23 418 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 IGDCC3Q8IVU1 814 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 SRRM1Q8IYB3 904 aaKnown RBP15.69■□□□□ 0.1
GPC3-202ENST00000394299 ADAM32Q8TC27 787 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 UBN1Q9NPG3 1134 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 AP4E1Q9UPM8 1137 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 INPP5FQ9Y2H2 1132 aa15.69■□□□□ 0.1
GPC3-202ENST00000394299 CLUHO75153 1309 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 EXOC1LA0A1B0GW35 172 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 BRCC3P46736 316 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 OTUD1Q5VV17 481 aaPredicted RBP15.68■□□□□ 0.1
GPC3-202ENST00000394299 CCSAPQ6IQ19 270 aaPredicted RBP15.68■□□□□ 0.1
GPC3-202ENST00000394299 CROCCP2Q86T23 111 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 TEKT4Q8WW24 435 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 PCED1BQ96HM7 432 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 FRMD8P1Q9BZ68 369 aaPredicted RBP15.68■□□□□ 0.1
GPC3-202ENST00000394299 NRDE2Q9H7Z3 1164 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 KIF9Q9HAQ2 790 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 KRT82Q9NSB4 513 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 MDM4O15151 490 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 GOT1P17174 413 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 SULT1E1P49888 294 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 TKTL1P51854 596 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 SNX16P57768 344 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 MRPS5P82675 430 aaKnown RBP15.68■□□□□ 0.1
GPC3-202ENST00000394299 STAT4Q14765 748 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 SLC9A4Q6AI14 798 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 CCDC110Q8TBZ0 833 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 SMOQ99835 787 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 ADAM2Q99965 735 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 EURLQ9NYK6 297 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 FAM169AQ9Y6X4 670 aa15.68■□□□□ 0.1
GPC3-202ENST00000394299 A0A087WUV0 522 aaPredicted RBP15.67■□□□□ 0.1
GPC3-202ENST00000394299 F5H423 210 aaPredicted RBP15.67■□□□□ 0.1
GPC3-202ENST00000394299 GPR182O15218 404 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 TCEA3O75764 348 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 AMHP03971 560 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 BRAFP15056 766 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 MATKP42679 507 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 ACADSBP45954 432 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 NME3Q13232 169 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 LPIN1Q14693 890 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 FBXO36Q8NEA4 188 aa15.67■□□□□ 0.1
GPC3-202ENST00000394299 KLHDC9Q8NEP7 349 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms