RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CDO1Q16878 200 aa25.39■■□□□ 1.65
LRFN4-202ENST00000393952 RAB6CQ53S08 254 aa25.39■■□□□ 1.65
LRFN4-202ENST00000393952 RBM23Q86U06 439 aaKnown RBP25.39■■□□□ 1.65
LRFN4-202ENST00000393952 MON1AQ86VX9 555 aa25.39■■□□□ 1.65
LRFN4-202ENST00000393952 ARFGAP1Q8N6T3 406 aa25.39■■□□□ 1.65
LRFN4-202ENST00000393952 CD101Q93033 1021 aa25.39■■□□□ 1.65
LRFN4-202ENST00000393952 HES6Q96HZ4 224 aa25.39■■□□□ 1.65
LRFN4-202ENST00000393952 RAB6CQ9H0N0 254 aa25.39■■□□□ 1.65
LRFN4-202ENST00000393952 CAPN9O14815 690 aa25.38■■□□□ 1.65
LRFN4-202ENST00000393952 TCF4P15884 667 aa25.38■■□□□ 1.65
LRFN4-202ENST00000393952 EPCAMP16422 314 aa25.38■■□□□ 1.65
LRFN4-202ENST00000393952 SSR1P43307 286 aaKnown RBP25.38■■□□□ 1.65
LRFN4-202ENST00000393952 TAS2R40P59535 323 aa25.38■■□□□ 1.65
LRFN4-202ENST00000393952 PLD1Q13393 1074 aa25.38■■□□□ 1.65
LRFN4-202ENST00000393952 RPS6KA1Q15418 735 aa25.38■■□□□ 1.65
LRFN4-202ENST00000393952 BTBD8Q5XKL5 378 aa25.38■■□□□ 1.65
LRFN4-202ENST00000393952 TBCBQ99426 244 aa25.38■■□□□ 1.65
LRFN4-202ENST00000393952 OSER1Q9NX31 292 aa25.38■■□□□ 1.65
LRFN4-202ENST00000393952 LRCH4O75427 683 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 MARCKSL1P49006 195 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 SULT1E1P49888 294 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 ACAP1Q15027 740 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 TAF12Q16514 161 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 SLC25A52Q3SY17 297 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 OTUD1Q5VV17 481 aaPredicted RBP25.37■■□□□ 1.65
LRFN4-202ENST00000393952 PAPD7Q5XG87 772 aaKnown RBP25.37■■□□□ 1.65
LRFN4-202ENST00000393952 DNAJB7Q7Z6W7 309 aaPredicted RBP25.37■■□□□ 1.65
LRFN4-202ENST00000393952 ARHGAP18Q8N392 663 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 FAM172AQ8WUF8 416 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 KRT35Q92764 455 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 PSMB7Q99436 277 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 NPY6RQ99463 290 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 TRIM62Q9BVG3 475 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 MAN1C1Q9NR34 630 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 EHD2Q9NZN4 543 aa25.37■■□□□ 1.65
LRFN4-202ENST00000393952 DDX3YO15523 660 aaKnown RBP25.36■■□□□ 1.65
LRFN4-202ENST00000393952 RNF8O76064 485 aa25.36■■□□□ 1.65
LRFN4-202ENST00000393952 C1RP00736 705 aa25.36■■□□□ 1.65
LRFN4-202ENST00000393952 LRG1P02750 347 aa25.36■■□□□ 1.65
LRFN4-202ENST00000393952 BEND5Q7L4P6 421 aa25.36■■□□□ 1.65
LRFN4-202ENST00000393952 NT5C3BQ969T7 300 aa25.36■■□□□ 1.65
LRFN4-202ENST00000393952 PSMG2Q969U7 264 aa25.36■■□□□ 1.65
LRFN4-202ENST00000393952 MYRFLQ96LU7 910 aa25.36■■□□□ 1.65
LRFN4-202ENST00000393952 SLITRK1Q96PX8 696 aa25.36■■□□□ 1.65
LRFN4-202ENST00000393952 TLE6Q9H808 572 aa25.36■■□□□ 1.65
LRFN4-202ENST00000393952 ABCC13Q9NSE7 274 aa25.36■■□□□ 1.65
LRFN4-202ENST00000393952 STAP1Q9ULZ2 295 aa25.36■■□□□ 1.65
LRFN4-202ENST00000393952 COLQQ9Y215 455 aaPredicted RBP25.36■■□□□ 1.65
LRFN4-202ENST00000393952 LRIT3Q3SXY7 679 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 PPM1LQ5SGD2 360 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 CENPIQ92674 756 aaPredicted RBP25.35■■□□□ 1.65
LRFN4-202ENST00000393952 MRPL38Q96DV4 380 aaKnown RBP25.35■■□□□ 1.65
LRFN4-202ENST00000393952 TRMT2BQ96GJ1 504 aaKnown RBP25.35■■□□□ 1.65
LRFN4-202ENST00000393952 PLEKHA4Q9H4M7 779 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 ZNF576Q9H609 170 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 TLR8Q9NR97 1041 aaKnown RBP25.35■■□□□ 1.65
LRFN4-202ENST00000393952 CALCOCO1Q9P1Z2 691 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 SNX12Q9UMY4 172 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 TRIOBPQ9H2D6 2365 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 MIF4GDA9UHW6 222 aaKnown RBP25.35■■□□□ 1.65
LRFN4-202ENST00000393952 ZDHHC11BP0C7U3 371 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 CTNNA2P26232 953 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 MIPP30301 263 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 CTNNA1P35221 906 aaKnown RBP25.35■■□□□ 1.65
LRFN4-202ENST00000393952 NRIP1P48552 1158 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 AMPD2Q01433 879 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 ITIH5Q86UX2 942 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 ADAM32Q8TC27 787 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 NUDT5Q9UKK9 219 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 ASB3Q9Y575 518 aa25.35■■□□□ 1.65
LRFN4-202ENST00000393952 A0A1W2PPC1 479 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 M0QYT0 321 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 ZMYND10O75800 440 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 URI1O94763 535 aaPredicted RBP25.34■■□□□ 1.65
LRFN4-202ENST00000393952 DESP17661 470 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 GJC1P36383 396 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 ATXN1P54253 815 aaKnown RBP25.34■■□□□ 1.65
LRFN4-202ENST00000393952 HDAC4P56524 1084 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 DUSP6Q16828 381 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 DQX1Q8TE96 717 aaKnown RBP25.34■■□□□ 1.65
LRFN4-202ENST00000393952 ALG3Q92685 438 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 ZNF512Q96ME7 567 aaPredicted RBP25.34■■□□□ 1.65
LRFN4-202ENST00000393952 ZNF334Q9HCZ1 680 aaPredicted RBP25.34■■□□□ 1.65
LRFN4-202ENST00000393952 RRN3Q9NYV6 651 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 PCSK1NQ9UHG2 260 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 PCDHA3Q9Y5H8 950 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 HCFC2Q9Y5Z7 792 aa25.34■■□□□ 1.65
LRFN4-202ENST00000393952 SYNJ2BP-COX16A0A087WUM0 186 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 CCL16O15467 120 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 SRGAP2O75044 1071 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 RFPL2O75678 378 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 CXCR5P32302 372 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 PCK1P35558 622 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 PSEN1P49768 467 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 PEX5P50542 639 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 SLC25A11Q02978 314 aaKnown RBP25.33■■□□□ 1.65
LRFN4-202ENST00000393952 TXNRD3NBQ6F5E7 133 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 STRADAQ7RTN6 431 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 BNIPLQ7Z465 357 aa25.33■■□□□ 1.65
LRFN4-202ENST00000393952 TAC4Q86UU9 113 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms