RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 HSPA12BQ96MM6 686 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 ACOX2Q99424 681 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 GABRG3Q99928 467 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 VRTNQ9H8Y1 702 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 CD93Q9NPY3 652 aa16.29■□□□□ 0.2
CHMP3-202ENST00000393773 NXF1Q9UBU9 619 aaKnown RBP16.29■□□□□ 0.2
CHMP3-202ENST00000393773 CHORDC1Q9UHD1 332 aaPredicted RBP16.29■□□□□ 0.2
CHMP3-202ENST00000393773 GCN1Q92616 2671 aaKnown RBP16.28■□□□□ 0.2
CHMP3-202ENST00000393773 ARHGAP33O14559 1287 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 CLIC2O15247 247 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 CACNG3O60359 315 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 GJB3O75712 270 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 CD59P13987 128 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 ATICP31939 592 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 WASP42768 502 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 ATXN3P54252 364 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-202ENST00000393773 ASIC1P78348 528 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 PREPLQ4J6C6 727 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-202ENST00000393773 GRAMD4Q6IC98 578 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 SCARA5Q6ZMJ2 495 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 RAB44Q7Z6P3 723 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-202ENST00000393773 FUKQ8N0W3 1084 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 XXYLT1Q8NBI6 393 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 SCFD1Q8WVM8 642 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 SYAP1Q96A49 352 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-202ENST00000393773 SMARCD1Q96GM5 515 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 SDCBP2Q9H190 292 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 KRT82Q9NSB4 513 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 DNAAF2Q9NVR5 837 aaKnown RBP16.28■□□□□ 0.2
CHMP3-202ENST00000393773 MARK1Q9P0L2 795 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 CYP8B1Q9UNU6 501 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 LHX6Q9UPM6 363 aa16.28■□□□□ 0.2
CHMP3-202ENST00000393773 H0Y626 953 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 TAF4O00268 1085 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 TRIM16O95361 564 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 CASP4P49662 377 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 CDH8P55286 799 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 TRPC3Q13507 836 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 LRSAM1Q6UWE0 723 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 TOGARAM2Q6ZUX3 1019 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 NELFCDQ8IXH7 590 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 C12orf56Q8IXR9 622 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 CHCHD4Q8N4Q1 142 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 IPO4Q8TEX9 1081 aaKnown RBP16.27■□□□□ 0.2
CHMP3-202ENST00000393773 SMOQ99835 787 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 MED10Q9BTT4 135 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 LRRC27Q9C0I9 530 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 CUEDC2Q9H467 287 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 DNAJC17Q9NVM6 304 aaKnown RBP16.27■□□□□ 0.2
CHMP3-202ENST00000393773 COMMD8Q9NX08 183 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 MTMR6Q9Y217 621 aa16.27■□□□□ 0.2
CHMP3-202ENST00000393773 A0A1W2PQD8 194 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 PRRT4C9JH25 899 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 NEDD8-MDP1E9PL57 170 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 TLR5O60602 858 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 ZNF217O75362 1048 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 AP1G2O75843 785 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 BEST1O76090 585 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 TYRP14679 529 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 SNRPFP62306 86 aaKnown RBP16.26■□□□□ 0.19
CHMP3-202ENST00000393773 BMT2Q1RMZ1 405 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 ZNF423Q2M1K9 1284 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 ZNF699Q32M78 642 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 HTR3DQ70Z44 454 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 PROSER1Q86XN7 944 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 TRIML1Q8N9V2 468 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 ELMO3Q96BJ8 720 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 ERLEC1Q96DZ1 483 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 P2RY11Q96G91 374 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 KLF16Q9BXK1 252 aaPredicted RBP16.26■□□□□ 0.19
CHMP3-202ENST00000393773 SLC6A17Q9H1V8 727 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 CSNK1G1Q9HCP0 422 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 HMGXB4Q9UGU5 601 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 RAD54BQ9Y620 910 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 APC2O95996 2303 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 ACACAQ13085 2346 aa16.26■□□□□ 0.19
CHMP3-202ENST00000393773 VNN1O95497 513 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 CCDC130P13994 396 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 ACAP1Q15027 740 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 NUDT18Q6ZVK8 323 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 GPRIN1Q7Z2K8 1008 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 CHPFQ8IZ52 775 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 LINC00301Q8NCQ3 95 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 DHX58Q96C10 678 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 TNIP3Q96KP6 325 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 MRGPRX1Q96LB2 322 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 CAMK1GQ96NX5 476 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 BBS2Q9BXC9 721 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 NACA2Q9H009 215 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 UPF2Q9HAU5 1272 aaKnown RBP16.25■□□□□ 0.19
CHMP3-202ENST00000393773 CYLDQ9NQC7 956 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 OSER1Q9NX31 292 aa16.25■□□□□ 0.19
CHMP3-202ENST00000393773 LRRIQ3A6PVS8 624 aaPredicted RBP16.24■□□□□ 0.19
CHMP3-202ENST00000393773 TBX18O95935 607 aa16.24■□□□□ 0.19
CHMP3-202ENST00000393773 CASP1P29466 404 aa16.24■□□□□ 0.19
CHMP3-202ENST00000393773 CLDN10P78369 228 aa16.24■□□□□ 0.19
CHMP3-202ENST00000393773 ORC1Q13415 861 aa16.24■□□□□ 0.19
CHMP3-202ENST00000393773 NCOA4Q13772 614 aa16.24■□□□□ 0.19
CHMP3-202ENST00000393773 HNRNPDQ14103 355 aaKnown RBP16.24■□□□□ 0.19
CHMP3-202ENST00000393773 ZNF667Q5HYK9 610 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms