RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 SPHK2Q9NRA0 654 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 NUDT5Q9UKK9 219 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 GON4LQ3T8J9 2241 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 ACACBO00763 2458 aa19.26■□□□□ 0.67
PDLIM7-205ENST00000393551 EPG5Q9HCE0 2579 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 CHD8Q9HCK8 2581 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 A0A1W2PQH9 124 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 MDM4O15151 490 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 HOXC11O43248 304 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 TULP3O75386 442 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 KLF8O95600 359 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 APODP05090 189 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 KIF11P52732 1056 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 PMS1P54277 932 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 GAD2Q05329 585 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 ZNF394Q53GI3 561 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 TCEAL6Q6IPX3 200 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 HTR3DQ70Z44 454 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 SCD5Q86SK9 330 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 TATDN2Q93075 761 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 TCEAL3Q969E4 200 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 P2RY11Q96G91 374 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 CNOT6LQ96LI5 555 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 PNPLA8Q9NP80 782 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.25■□□□□ 0.672e-6■■■■□ 24.3
PDLIM7-205ENST00000393551 PCDHGA5Q9Y5G8 931 aa19.25■□□□□ 0.67
PDLIM7-205ENST00000393551 TM4SF5O14894 197 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 BCKDHBP21953 392 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 MPLP40238 635 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 TNFRSF4P43489 277 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 CBWD6Q4V339 395 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 CBWD3Q5JTY5 395 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 CBWD5Q5RIA9 395 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 ZC3H3Q8IXZ2 948 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 SLC4A11Q8NBS3 891 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 FBXL13Q8NEE6 735 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 OLIG1Q8TAK6 271 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 SPATA20Q8TB22 786 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 DUSP16Q9BY84 665 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 RAB20Q9NX57 234 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 PCDHA5Q9Y5H7 936 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 USP3Q9Y6I4 520 aa19.24■□□□□ 0.67
PDLIM7-205ENST00000393551 PLXND1Q9Y4D7 1925 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 FOXD2O60548 495 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 ATP5C1P36542 298 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 MXI1P50539 228 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 LIMK1P53667 647 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 RAD23BP54727 409 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 ANO4Q32M45 955 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 AASDHQ4L235 1098 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 COBLL1Q53SF7 1204 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 ZNF658Q5TYW1 1059 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 PMS2CLQ68D20 193 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 ANKRD40Q6AI12 368 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 MIB1Q86YT6 1006 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 FRMD1Q8N878 549 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 NACA2Q9H009 215 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 CISHQ9NSE2 258 aa19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 TNRC6BQ9UPQ9 1833 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-205ENST00000393551 BCLAF3A2AJT9 711 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 TRIM49BA6NDI0 452 aa19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 CETN3O15182 167 aa19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 RARGP13631 454 aa19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 USP39Q53GS9 565 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 KLHDC10Q6PID8 442 aa19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 Q6ZNB5 142 aa19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 CCDC186Q7Z3E2 898 aa19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 FAXDC2Q96IV6 333 aa19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 HEXIM2Q96MH2 286 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 DEC1Q9P2X7 70 aa19.22■□□□□ 0.67
PDLIM7-205ENST00000393551 TBC1D3BA6NDS4 549 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 RHOBTB1O94844 696 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 EPB41P11171 864 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 GBP1P32455 592 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 CREB5Q02930 508 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 ELF2Q15723 593 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 HSF5Q4G112 596 aaPredicted RBP19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 PPM1JQ5JR12 505 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 TTC30AQ86WT1 665 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 ZNF276Q8N554 614 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 TERB1Q8NA31 727 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 C12orf50Q8NA57 414 aaPredicted RBP19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 CCDC150Q8NCX0 1101 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 RLN3Q8WXF3 142 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 TMEM176AQ96HP8 235 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 GSDMAQ96QA5 445 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 VPS45Q9NRW7 570 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 NAGPAQ9UK23 515 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 COQ4Q9Y3A0 265 aa19.21■□□□□ 0.67
PDLIM7-205ENST00000393551 CACNG3O60359 315 aa19.2■□□□□ 0.66
PDLIM7-205ENST00000393551 KLKB1P03952 638 aa19.2■□□□□ 0.66
PDLIM7-205ENST00000393551 ADRB1P08588 477 aa19.2■□□□□ 0.66
PDLIM7-205ENST00000393551 TYRP14679 529 aa19.2■□□□□ 0.66
PDLIM7-205ENST00000393551 PI4KAP42356 2102 aa19.2■□□□□ 0.66
PDLIM7-205ENST00000393551 RAB41Q5JT25 222 aa19.2■□□□□ 0.66
PDLIM7-205ENST00000393551 EOGTQ5NDL2 527 aa19.2■□□□□ 0.66
PDLIM7-205ENST00000393551 C10orf120Q5SQS8 335 aa19.2■□□□□ 0.66
PDLIM7-205ENST00000393551 STPG1Q5TH74 334 aa19.2■□□□□ 0.66
PDLIM7-205ENST00000393551 BTBD8Q5XKL5 378 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms