RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 ECHS1P30084 290 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 GRIK1P39086 918 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 ALDH7A1P49419 539 aaKnown RBP18.25■□□□□ 0.51
MBD4-202ENST00000393278 DRG2P55039 364 aaKnown RBP18.25■□□□□ 0.51
MBD4-202ENST00000393278 SYPL2Q5VXT5 272 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 DRICH1Q6PGQ1 229 aaPredicted RBP18.25■□□□□ 0.51
MBD4-202ENST00000393278 VSIG1Q86XK7 387 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 DDX42Q86XP3 938 aaKnown RBP eCLIP18.25■□□□□ 0.51
MBD4-202ENST00000393278 MAP7D3Q8IWC1 876 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 TMEM199Q8N511 208 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 ATL2Q8NHH9 583 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 GRK7Q8WTQ7 553 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 CAVIN3Q969G5 261 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 ZNF689Q96CS4 500 aaPredicted RBP18.25■□□□□ 0.51
MBD4-202ENST00000393278 CALN1Q9BXU9 219 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 FEZ2Q9UHY8 353 aaPredicted RBP18.25■□□□□ 0.51
MBD4-202ENST00000393278 NAALADL1Q9UQQ1 740 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 H7C4K7 107 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 TNFRSF10BO14763 440 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 LIASO43766 372 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 CST8O60676 142 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 PITX1P78337 314 aaPredicted RBP18.25■□□□□ 0.51
MBD4-202ENST00000393278 DEFB103AP81534 67 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 DPYSL3Q14195 570 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 KRT81Q14533 505 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 ZC3H12AQ5D1E8 599 aaKnown RBP18.25■□□□□ 0.51
MBD4-202ENST00000393278 RTP2Q5QGT7 225 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 ERMARDQ5T6L9 678 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 VSTM1Q6UX27 236 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 SYDE1Q6ZW31 735 aaPredicted RBP18.25■□□□□ 0.51
MBD4-202ENST00000393278 RFX6Q8HWS3 928 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 FAM71BQ8TC56 605 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 FAM118BQ9BPY3 351 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 TTPALQ9BTX7 342 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 DPH5Q9H2P9 285 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 RC3H2Q9HBD1 1191 aaKnown RBP18.25■□□□□ 0.51
MBD4-202ENST00000393278 PCDH18Q9HCL0 1135 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 GPATCH2LQ9NWQ4 482 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 PCDHB5Q9Y5E4 795 aa18.25■□□□□ 0.51
MBD4-202ENST00000393278 COL4A4P53420 1690 aaPredicted RBP18.24■□□□□ 0.51
MBD4-202ENST00000393278 CAPN9O14815 690 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 RDXP35241 583 aaKnown RBP18.24■□□□□ 0.51
MBD4-202ENST00000393278 MAGEA11P43364 429 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 TNNT3P45378 269 aaPredicted RBP18.24■□□□□ 0.51
MBD4-202ENST00000393278 SLC5A3P53794 718 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 WDR5P61964 334 aaKnown RBP18.24■□□□□ 0.51
MBD4-202ENST00000393278 MMRN1Q13201 1228 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 NNTQ13423 1086 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 HLTFQ14527 1009 aaKnown RBP eCLIP18.24■□□□□ 0.51
MBD4-202ENST00000393278 CASP8Q14790 479 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 CA9Q16790 459 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 ANKS3Q6ZW76 656 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 TAS1R1Q7RTX1 841 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 TTC13Q8NBP0 860 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 OXCT2Q9BYC2 517 aaPredicted RBP18.24■□□□□ 0.51
MBD4-202ENST00000393278 TRIM31Q9BZY9 425 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 RRN3Q9NYV6 651 aa18.24■□□□□ 0.51
MBD4-202ENST00000393278 ZNF487B1APH4 448 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 M0QYT0 321 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 TRIM66O15016 1216 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 GAS8O95995 478 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 KRT17Q04695 432 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 PPP1R7Q15435 360 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 DPYSL2Q16555 572 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 SND1Q7KZF4 910 aaKnown RBP eCLIP18.23■□□□□ 0.51
MBD4-202ENST00000393278 SCN4BQ8IWT1 228 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 RNF168Q8IYW5 571 aaPredicted RBP18.23■□□□□ 0.51
MBD4-202ENST00000393278 CCDC185Q8N715 623 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 SCAMP5Q8TAC9 235 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 NKD2Q969F2 451 aaPredicted RBP18.23■□□□□ 0.51
MBD4-202ENST00000393278 C8orf48Q96LL4 319 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 CCDC114Q96M63 670 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 GDAP1L1Q96MZ0 367 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 ZNF670Q9BS34 389 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 FRMD8P1Q9BZ68 369 aaPredicted RBP18.23■□□□□ 0.51
MBD4-202ENST00000393278 DNPEPQ9ULA0 475 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 AP4E1Q9UPM8 1137 aa18.23■□□□□ 0.51
MBD4-202ENST00000393278 MKI67P46013 3256 aaKnown RBP18.23■□□□□ 0.51
MBD4-202ENST00000393278 BAIAP3O94812 1187 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 FAM153BP0C7A2 387 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 NCAM1P13591 858 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 IL4RP24394 825 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 DYNLT1P63172 113 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 LMNB2Q03252 620 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 DEUP1Q05D60 604 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 SMARCB1Q12824 385 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 GPR17Q13304 367 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 PTK6Q13882 451 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 BYSLQ13895 437 aaKnown RBP18.22■□□□□ 0.51
MBD4-202ENST00000393278 FAM153CQ494X1 144 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 RSPO2Q6UXX9 243 aaPredicted RBP18.22■□□□□ 0.51
MBD4-202ENST00000393278 BEND5Q7L4P6 421 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 UBE2Q1Q7Z7E8 422 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 FAM131BQ86XD5 332 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 PSTKQ8IV42 348 aaKnown RBP18.22■□□□□ 0.51
MBD4-202ENST00000393278 SLC7A14Q8TBB6 771 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 HAUS1Q96CS2 278 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 FAF2Q96CS3 445 aa18.22■□□□□ 0.51
MBD4-202ENST00000393278 PGAP3Q96FM1 320 aaPredicted RBP18.22■□□□□ 0.51
MBD4-202ENST00000393278 IGSF21Q96ID5 467 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms