RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 ADPGKQ9BRR6 497 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 CCDC106Q9BWC9 280 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 IFT122Q9HBG6 1241 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 PTPRHQ9HD43 1115 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 PAPOLBQ9NRJ5 636 aaKnown RBP10.38□□□□□ -0.75
COL17A1-203ENST00000393211 ZNF277Q9NRM2 450 aaPredicted RBP10.38□□□□□ -0.75
COL17A1-203ENST00000393211 RAB6BQ9NRW1 208 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 THAP1Q9NVV9 213 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 HOXC10Q9NYD6 342 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 IL1RAPL1Q9NZN1 696 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 DLGAP2Q9P1A6 1054 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 PCSK1NQ9UHG2 260 aa10.38□□□□□ -0.75
COL17A1-203ENST00000393211 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.38□□□□□ -0.75
COL17A1-203ENST00000393211 LCTP09848 1927 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 IGKV6-21A0A0C4DH24 114 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 FAM159BA6NKW6 160 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 ACKR2O00590 384 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 PRPSAP2O60256 369 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 CILPO75339 1184 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 MICAL2O94851 1124 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 KLHL2O95198 593 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 BPGMP07738 259 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 MYL4P12829 197 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 ANPEPP15144 967 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 DESP17661 470 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 AOC1P19801 751 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 RPS12P25398 132 aaKnown RBP10.37□□□□□ -0.75
COL17A1-203ENST00000393211 CRABP2P29373 138 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 GPD2P43304 727 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 MAGEA3P43357 314 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 GCLCP48506 637 aaPredicted RBP10.37□□□□□ -0.75
COL17A1-203ENST00000393211 RPL26P61254 145 aaKnown RBP10.37□□□□□ -0.75
COL17A1-203ENST00000393211 XIAPP98170 497 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 CXCL9Q07325 125 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 LAMTOR4Q0VGL1 99 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 NAB1Q13506 487 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 RBBP5Q15291 538 aaKnown RBP10.37□□□□□ -0.75
COL17A1-203ENST00000393211 STILQ15468 1287 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 CWF19L1Q69YN2 538 aaKnown RBP10.37□□□□□ -0.75
COL17A1-203ENST00000393211 SLC9A4Q6AI14 798 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 SCARA3Q6AZY7 606 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 SCARA5Q6ZMJ2 495 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 CATSPERGQ6ZRH7 1159 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 CDKL3Q8IVW4 592 aaPredicted RBP10.37□□□□□ -0.75
COL17A1-203ENST00000393211 CTAGE3PQ8IX95 158 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 EMC1Q8N766 993 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 PLD5Q8N7P1 536 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 SPDYE1Q8NFV5 336 aaPredicted RBP10.37□□□□□ -0.75
COL17A1-203ENST00000393211 GSDMBQ8TAX9 411 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 ZNF526Q8TF50 670 aaPredicted RBP10.37□□□□□ -0.75
COL17A1-203ENST00000393211 CFAP36Q96G28 342 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 TMEM176AQ96HP8 235 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 FAM161BQ96MY7 647 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 PCYT2Q99447 389 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 VCX3BQ9H321 246 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 XAB2Q9HCS7 855 aaKnown RBP10.37□□□□□ -0.75
COL17A1-203ENST00000393211 PICK1Q9NRD5 415 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 KRT82Q9NSB4 513 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 ETNK2Q9NVF9 386 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 PPARGC1AQ9UBK2 798 aaKnown RBP10.37□□□□□ -0.75
COL17A1-203ENST00000393211 ANK1P16157 1881 aa10.37□□□□□ -0.75
COL17A1-203ENST00000393211 DCAF8L1A6NGE4 600 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 SLC15A5A6NIM6 579 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 SPDYE5A6NIY4 337 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 C2CD4BA6NLJ0 364 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 H3BRJ5 948 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 APOL1O14791 398 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 GCATO75600 419 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 FARP2O94887 1054 aaPredicted RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 ZBED1O96006 694 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 ENO1P06733 434 aaKnown RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 ZFXP17010 805 aaPredicted RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 PTPRAP18433 802 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 KCNA3P22001 575 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 CACNA2D1P54289 1103 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 MRPS5P82675 430 aaKnown RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 SARNPP82979 210 aaKnown RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 DSG1Q02413 1049 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 STX3Q13277 289 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 HNRNPDQ14103 355 aaKnown RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 KRT81Q14533 505 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 CHI3L2Q15782 390 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 HSF5Q4G112 596 aaPredicted RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 FAM102AQ5T9C2 384 aaPredicted RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 CDHR3Q6ZTQ4 885 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 CYP4V2Q6ZWL3 525 aaPredicted RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 TTC7BQ86TV6 843 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 PRPF39Q86UA1 669 aaKnown RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 ALYREFQ86V81 257 aaKnown RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 ZC3H18Q86VM9 953 aaKnown RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 CAND1Q86VP6 1230 aaKnown RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 TREML1Q86YW5 311 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 ARID3BQ8IVW6 561 aaPredicted RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 WDR75Q8IWA0 830 aaKnown RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 ULK2Q8IYT8 1036 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 RBM15BQ8NDT2 890 aaKnown RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 SEPT1Q8WYJ6 367 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 PRR11Q96HE9 360 aaPredicted RBP10.36□□□□□ -0.75
COL17A1-203ENST00000393211 ACAP3Q96P50 834 aa10.36□□□□□ -0.75
COL17A1-203ENST00000393211 PEBP4Q96S96 227 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms