RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 LRRC8DQ7L1W4 858 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 COLGALT1Q8NBJ5 622 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 GMCL1P1Q8NEA9 526 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 SOAT1P35610 550 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 PRIM2P49643 509 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 CSE1LP55060 971 aaKnown RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 TIGD7Q6NT04 549 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 ARHGEF19Q8IW93 802 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 APOPT1Q96IL0 206 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 POLLQ9UGP5 575 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 FAM237AA0A1B0GTK4 181 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 IQCA1LA6NCM1 817 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 PRR23D1E9PI22 279 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 UBDO15205 165 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 PRR23D2P0DMB1 279 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 CYP2B6P20813 491 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 GP5P40197 560 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 MLH1P40692 756 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 GCLCP48506 637 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 PSMD7P51665 324 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 DDX39BQ13838 428 aaKnown RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 CSHL1Q14406 222 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 VPS72Q15906 364 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 GALNTL6Q49A17 601 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 ZNF484Q5JVG2 852 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 SPDYCQ5MJ68 293 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 DDX53Q86TM3 631 aaKnown RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 AGBL3Q8NEM8 1001 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 GPRC5AQ8NFJ5 357 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 CYP2W1Q8TAV3 490 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 GTF3C2Q8WUA4 911 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 OXNAD1Q96HP4 312 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 SRPK1Q96SB4 655 aaKnown RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 DNAJC18Q9H819 358 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 AVENQ9NQS1 362 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 THAP1Q9NVV9 213 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 PRG3Q9Y2Y8 225 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 F8W810 466 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 NR5A2O00482 541 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 PRRG1O14668 218 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 CBX6O95503 412 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 RAP1GAPP47736 663 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 PRKAA1Q13131 559 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 ATP6AP1LQ52LC2 224 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 ZSWIM2Q8NEG5 633 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 RIN3Q8TB24 985 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 ZNF75CPQ92670 426 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 TBCBQ99426 244 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 SELENONQ9NZV5 590 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 USP32Q8NFA0 1604 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 KBTBD13C9JR72 458 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 IRF1P10914 325 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 CYP2F1P24903 491 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 GMPSP49915 693 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 ALDH5A1P51649 535 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 NUDT18Q6ZVK8 323 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 SYTL2Q9HCH5 934 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 TUBGCP4Q9UGJ1 667 aa13.51□□□□□ -0.25
LCA5-202ENST00000392959 PNMA8BQ9ULN7 279 aaPredicted RBP13.51□□□□□ -0.25
LCA5-202ENST00000392959 CEP152O94986 1710 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 RNF103O00237 685 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 RGS5O15539 181 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 TRIM13O60858 407 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 FAM58BPP0C7Q3 252 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 ODC1P11926 461 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 CCDC142Q17RM4 750 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 STYK1Q6J9G0 422 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 OTOAQ7RTW8 1153 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 SYTL5Q8TDW5 730 aaPredicted RBP13.5□□□□□ -0.25
LCA5-202ENST00000392959 STK32AQ8WU08 396 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 AGO4Q9HCK5 861 aaKnown RBP13.5□□□□□ -0.25
LCA5-202ENST00000392959 GPRC5DQ9NZD1 345 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 VANGL2Q9ULK5 521 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 ITM2BQ9Y287 266 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 SLITRK3O94933 977 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 FCGR1AP12314 374 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 CASP7P55210 303 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 R3HDM1Q15032 1099 aaKnown RBP13.5□□□□□ -0.25
LCA5-202ENST00000392959 NAIF1Q69YI7 327 aaPredicted RBP13.5□□□□□ -0.25
LCA5-202ENST00000392959 SLC30A10Q6XR72 485 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 SAMD7Q7Z3H4 446 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 MIB1Q86YT6 1006 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 CCDC103Q8IW40 242 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 PARK7Q99497 189 aaKnown RBP13.5□□□□□ -0.25
LCA5-202ENST00000392959 SAR1AQ9NR31 198 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 DDTLA6NHG4 134 aaPredicted RBP13.5□□□□□ -0.25
LCA5-202ENST00000392959 NCAM2O15394 837 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 MT-CO1P00395 513 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 SLC1A6P48664 564 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 RAD23AP54725 363 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 TTMPQ5BVD1 217 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 GNASQ5JWF2 1037 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 ETNPPLQ8TBG4 499 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 USP13Q92995 863 aaPredicted RBP13.5□□□□□ -0.25
LCA5-202ENST00000392959 FAM136AQ96C01 138 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 DNPEPQ9ULA0 475 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 SH3BP1Q9Y3L3 701 aa13.5□□□□□ -0.25
LCA5-202ENST00000392959 CEP170BQ9Y4F5 1589 aaPredicted RBP13.5□□□□□ -0.25
LCA5-202ENST00000392959 NCF1BA6NI72 391 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms