RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 RASA2Q15283 850 aa26.64■■□□□ 1.86
SMARCD3-203ENST00000392811 DPYSL2Q16555 572 aa26.64■■□□□ 1.86
SMARCD3-203ENST00000392811 OSBPL7Q9BZF2 842 aa26.64■■□□□ 1.86
SMARCD3-203ENST00000392811 DHX35Q9H5Z1 703 aaKnown RBP26.64■■□□□ 1.86
SMARCD3-203ENST00000392811 NRDE2Q9H7Z3 1164 aa26.64■■□□□ 1.86
SMARCD3-203ENST00000392811 NMRK2Q9NPI5 230 aa26.64■■□□□ 1.86
SMARCD3-203ENST00000392811 SAMD15Q9P1V8 674 aa26.64■■□□□ 1.86
SMARCD3-203ENST00000392811 XPO1O14980 1071 aaKnown RBP26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 IGFBP6P24592 240 aaPredicted RBP26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 RBL1P28749 1068 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 CTGFP29279 349 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 GEMIN4P57678 1058 aaKnown RBP26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 EFTUD2Q15029 972 aaKnown RBP eCLIP26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 C3orf62Q6ZUJ4 267 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 FUKQ8N0W3 1084 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 RTP4Q96DX8 246 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 MAGEB5Q9BZ81 275 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 TRABDQ9H4I3 376 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 PAK5Q9P286 719 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 PSMC3IPQ9P2W1 217 aaPredicted RBP26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 CDY2AQ9Y6F7 541 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 FAM47DPA6NHR8 397 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 MEIS3P2A8K0S8 358 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 CYB561D2O14569 222 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 DUSP11O75319 330 aaKnown RBP26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 KRT15P19012 456 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 ACAT1P24752 427 aaKnown RBP26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 STX2P32856 288 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 PPP1R21Q6ZMI0 780 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 PIGZQ86VD9 579 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 HNRNPABQ99729 332 aaKnown RBP26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 KIF9Q9HAQ2 790 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 AP4E1Q9UPM8 1137 aa26.63■■□□□ 1.85
SMARCD3-203ENST00000392811 GOLGA6L7A0A1B0GV03 622 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 BCLAF3A2AJT9 711 aaKnown RBP26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 CFAP69A5D8W1 941 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 SPAG7O75391 227 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 ZBED1O96006 694 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 SYCP2LQ5T4T6 812 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 RGMBQ6NW40 437 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 PALM2Q8IXS6 379 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 CCDC185Q8N715 623 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 FBF1Q8TES7 1133 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 ZFYVE28Q9HCC9 887 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 RAB6BQ9NRW1 208 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 FGFR1OP2Q9NVK5 253 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 FETUBQ9UGM5 382 aa26.62■■□□□ 1.85
SMARCD3-203ENST00000392811 CLDN5O00501 218 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 CHADO15335 359 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 FSBPO95073 299 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 CPP00450 1065 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 ITIH4Q14624 930 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 GNASQ5JWF2 1037 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 WSCD1Q658N2 575 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 ANKS4BQ8N8V4 417 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 LRRN4Q8WUT4 740 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 NDRG1Q92597 394 aaKnown RBP26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 MTG1Q9BT17 334 aaPredicted RBP26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 DUSP16Q9BY84 665 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 ACSS3Q9H6R3 686 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 MTMR10Q9NXD2 777 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 CACNG4Q9UBN1 327 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 CHMP2BQ9UQN3 213 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 M0QZ92 97 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 ADIGQ0VDE8 80 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 EFHC1Q5JVL4 640 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 IGDCC3Q8IVU1 814 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 KCTD15Q96SI1 283 aaPredicted RBP26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 ST3GAL5Q9UNP4 418 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 TRPV2Q9Y5S1 764 aa26.61■■□□□ 1.85
SMARCD3-203ENST00000392811 KPNA6O60684 536 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 RARBP10826 455 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 PTPN1P18031 435 aaKnown RBP26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 CRHR2Q13324 411 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 SPRED3Q2MJR0 410 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 NBPF20Q3BBV1 942 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 NUGGCQ68CJ6 796 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 CXCL17Q6UXB2 119 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 SAPCD2Q86UD0 394 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 CCT6BQ92526 530 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 SGSM3Q96HU1 749 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 MAGEB18Q96M61 343 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 SENP1Q9P0U3 644 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 GTF2IRD1Q9UHL9 959 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 PRPF4O43172 522 aaKnown RBP eCLIP26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 PIAS1O75925 651 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 BEST1O76090 585 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 TSHRP16473 764 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 ELK3P41970 407 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 MATKP42679 507 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 WDR4P57081 412 aaKnown RBP26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 GBE1Q04446 702 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 PAQR9Q6ZVX9 377 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 STRADAQ7RTN6 431 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 DEFB106AQ8N104 65 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 WNT8BQ93098 351 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 TGS1Q96RS0 853 aaKnown RBP26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 DHRS4Q9BTZ2 278 aa26.6■■□□□ 1.85
SMARCD3-203ENST00000392811 CAPN7Q9Y6W3 813 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms