RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 C1QAP02745 245 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 CYP2C8P10632 490 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 ADORA2AP29274 412 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 ETV4P43268 484 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 SNX16P57768 344 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 SH2D5Q6ZV89 423 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 ZDHHC17Q8IUH5 632 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 GTF3C2Q8WUA4 911 aaPredicted RBP12.79□□□□□ -0.36
RFC5-201ENST00000392542 KATNBL1Q9H079 304 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 CXCL16Q9H2A7 254 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 PLEKHA5Q9HAU0 1116 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 HAO1Q9UJM8 370 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 L3MBTL1Q9Y468 752 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 T-ENOLP0DO92 83 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 GJA5P36382 358 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 GCLCP48506 637 aaPredicted RBP12.79□□□□□ -0.36
RFC5-201ENST00000392542 HDAC4P56524 1084 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 MARCH8Q5T0T0 291 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 FAM182AQ5T1J6 154 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 TTC39BQ5VTQ0 682 aaPredicted RBP12.79□□□□□ -0.36
RFC5-201ENST00000392542 PRPF39Q86UA1 669 aaKnown RBP12.79□□□□□ -0.36
RFC5-201ENST00000392542 SLC26A11Q86WA9 606 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 CDKL3Q8IVW4 592 aaPredicted RBP12.79□□□□□ -0.36
RFC5-201ENST00000392542 SCUBE3Q8IX30 993 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 GPRC5AQ8NFJ5 357 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 STK32AQ8WU08 396 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 PTPRN2Q92932 1015 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 STAMBPL1Q96FJ0 436 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 SNX27Q96L92 541 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 ZMAT2Q96NC0 199 aaKnown RBP12.79□□□□□ -0.36
RFC5-201ENST00000392542 TMEM237Q96Q45 408 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 POPDC2Q9HBU9 364 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.79□□□□□ -0.36
RFC5-201ENST00000392542 SNTG2Q9NY99 539 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 ZFP69BQ9UJL9 534 aa12.79□□□□□ -0.36
RFC5-201ENST00000392542 GABBR2O75899 941 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 PYGBP11216 843 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 IBSPP21815 317 aaPredicted RBP12.78□□□□□ -0.36
RFC5-201ENST00000392542 CCNA1P78396 465 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 SNAPC2Q13487 334 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 PLEKHG4Q58EX7 1191 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 FAXCQ5TGI0 409 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 ARHGAP17Q68EM7 881 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 C4orf22Q6V702 233 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 CAND1Q86VP6 1230 aaKnown RBP12.78□□□□□ -0.36
RFC5-201ENST00000392542 UNC93AQ86WB7 457 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 LRRC52Q8N7C0 313 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 TSSK1BQ9BXA7 367 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 NRDE2Q9H7Z3 1164 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 ALG13Q9NP73 1137 aaKnown RBP12.78□□□□□ -0.36
RFC5-201ENST00000392542 KANSL3Q9P2N6 904 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 ZC3H7BQ9UGR2 993 aaKnown RBP12.78□□□□□ -0.36
RFC5-201ENST00000392542 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.78□□□□□ -0.36
RFC5-201ENST00000392542 FAM155BO75949 473 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 MAP3K6O95382 1288 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 CYP2F1P24903 491 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 PTPN9P43378 593 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 ZBTB6Q15916 424 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 ACCSLQ4AC99 568 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 TAF1BQ53T94 588 aaPredicted RBP12.78□□□□□ -0.36
RFC5-201ENST00000392542 PPP6R3Q5H9R7 873 aaPredicted RBP12.78□□□□□ -0.36
RFC5-201ENST00000392542 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
RFC5-201ENST00000392542 PPM1NQ8N819 430 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 MCUQ8NE86 351 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 BEST2Q8NFU1 509 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 GIMAP7Q8NHV1 300 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 RFWD2Q8NHY2 731 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 SLC7A6OSQ96CW6 309 aaPredicted RBP12.78□□□□□ -0.36
RFC5-201ENST00000392542 FAM111AQ96PZ2 611 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 B3GNT5Q9BYG0 378 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 TRIM55Q9BYV6 548 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 SAR1AQ9NR31 198 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 NOP53Q9NZM5 478 aaKnown RBP12.78□□□□□ -0.36
RFC5-201ENST00000392542 RNF181Q9P0P0 153 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 TUBGCP4Q9UGJ1 667 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 ZNF180Q9UJW8 692 aa12.78□□□□□ -0.36
RFC5-201ENST00000392542 TRDMT1O14717 391 aaKnown RBP12.77□□□□□ -0.37
RFC5-201ENST00000392542 GSTA2P09210 222 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 PRKCHP24723 683 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 RASSF2P50749 326 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 OVGP1Q12889 678 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 DPYSL2Q16555 572 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 ZNF449Q6P9G9 518 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 LRRC6Q86X45 466 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 CTAGE3PQ8IX95 158 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 OR6B3Q8NGW1 331 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 CCDC110Q8TBZ0 833 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 TTC17Q96AE7 1141 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 LRRC39Q96DD0 335 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 C11orf84Q9BUA3 381 aaPredicted RBP12.77□□□□□ -0.37
RFC5-201ENST00000392542 PLAC1Q9HBJ0 212 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 DCTN4Q9UJW0 460 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 TRIM49D1C9J1S8 452 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 TRAFD1O14545 582 aaPredicted RBP12.77□□□□□ -0.37
RFC5-201ENST00000392542 KRT37O76014 449 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 TGDSO95455 350 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 ANP32DO95626 131 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 APRTP07741 180 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 MMP3P08254 477 aa12.77□□□□□ -0.37
RFC5-201ENST00000392542 SNRPAP09012 282 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms