RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 BNIPLQ7Z465 357 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 NPY6RQ99463 290 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 ZNF670Q9BS34 389 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 TSPYL1Q9H0U9 437 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 POPDC2Q9HBU9 364 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 GPATCH2LQ9NWQ4 482 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 TANC1Q9C0D5 1861 aa22.26■■□□□ 1.15
SPHK1-202ENST00000392496 H0YGN5 161 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 TRAPPC3O43617 180 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 PARNO95453 639 aaKnown RBP22.25■■□□□ 1.15
SPHK1-202ENST00000392496 IL4RP24394 825 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 ITGA8P53708 1063 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 ABI1Q8IZP0 508 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 ANKLE1Q8NAG6 615 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 FAF2Q96CS3 445 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 PNPLA8Q9NP80 782 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 DMAP1Q9NPF5 467 aaPredicted RBP22.25■■□□□ 1.15
SPHK1-202ENST00000392496 TMLHEQ9NVH6 421 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 VPS18Q9P253 973 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 ANAPC5Q9UJX4 755 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 NFS1Q9Y697 457 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 PTPRDP23468 1912 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 CA9Q16790 459 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 DCAF6Q58WW2 860 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 ANKRD20A8PQ5CZ79 823 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 COL13A1Q5TAT6 717 aaPredicted RBP22.25■■□□□ 1.15
SPHK1-202ENST00000392496 SLC39A5Q6ZMH5 540 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 GPRIN1Q7Z2K8 1008 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 LRRTM3Q86VH5 581 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 PSTKQ8IV42 348 aaKnown RBP22.25■■□□□ 1.15
SPHK1-202ENST00000392496 SCML4Q8N228 414 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.25■■□□□ 1.15
SPHK1-202ENST00000392496 PCDH9Q9HC56 1237 aa22.25■■□□□ 1.15
SPHK1-202ENST00000392496 SAE1Q9UBE0 346 aaPredicted RBP22.25■■□□□ 1.15
SPHK1-202ENST00000392496 NLRC5Q86WI3 1866 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 NDC80O14777 642 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 NRP1O14786 923 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 MCF2LO15068 1137 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 HOXA2O43364 376 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 OAZ2O95190 189 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 CXCL10P02778 98 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 RARGP13631 454 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 BDNFP23560 247 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 VPS41P49754 854 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 ATXN1P54253 815 aaKnown RBP22.24■■□□□ 1.15
SPHK1-202ENST00000392496 C4orf50Q6ZRC1 276 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 IRGQQ8WZA9 623 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 PKNOX2Q96KN3 472 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 CASD1Q96PB1 797 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 TMEM209Q96SK2 561 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 CRISPLD2Q9H0B8 497 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 PABPC3Q9H361 631 aaKnown RBP22.24■■□□□ 1.15
SPHK1-202ENST00000392496 DNAJB4Q9UDY4 337 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 LRFN2Q9ULH4 789 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 AP4E1Q9UPM8 1137 aa22.24■■□□□ 1.15
SPHK1-202ENST00000392496 BRCA2P51587 3418 aa22.23■■□□□ 1.15
SPHK1-202ENST00000392496 ZBED1O96006 694 aa22.23■■□□□ 1.15
SPHK1-202ENST00000392496 PECAM1P16284 738 aaPredicted RBP22.23■■□□□ 1.15
SPHK1-202ENST00000392496 TGM2P21980 687 aa22.23■■□□□ 1.15
SPHK1-202ENST00000392496 L1CAMP32004 1257 aa22.23■■□□□ 1.15
SPHK1-202ENST00000392496 CDR1P51861 262 aa22.23■■□□□ 1.15
SPHK1-202ENST00000392496 EIF3EP60228 445 aaKnown RBP22.23■■□□□ 1.15
SPHK1-202ENST00000392496 NOMO1Q15155 1222 aa22.23■■□□□ 1.15
SPHK1-202ENST00000392496 OTUD1Q5VV17 481 aaPredicted RBP22.23■■□□□ 1.15
SPHK1-202ENST00000392496 IZUMO3Q5VZ72 239 aa22.23■■□□□ 1.15
SPHK1-202ENST00000392496 SLC9A4Q6AI14 798 aa22.23■■□□□ 1.15
SPHK1-202ENST00000392496 TOX2Q96NM4 488 aa22.23■■□□□ 1.15
SPHK1-202ENST00000392496 TMEM121Q9BTD3 319 aa22.23■■□□□ 1.15
SPHK1-202ENST00000392496 RHOBTB2Q9BYZ6 727 aa22.23■■□□□ 1.15
SPHK1-202ENST00000392496 PRG3Q9Y2Y8 225 aaPredicted RBP22.23■■□□□ 1.15
SPHK1-202ENST00000392496 SGK1O00141 431 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 DNALI1O14645 258 aaPredicted RBP22.22■■□□□ 1.15
SPHK1-202ENST00000392496 APOL1O14791 398 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 SYN3O14994 580 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 TADA2AO75478 443 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 RDXP35241 583 aaKnown RBP22.22■■□□□ 1.15
SPHK1-202ENST00000392496 RABGGTBP53611 331 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 HFE2Q6ZVN8 426 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 PQLC3Q8N755 202 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 GLIS1Q8NBF1 620 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 P3H4Q92791 437 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 FOXP3Q9BZS1 431 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 HIPK3Q9H422 1215 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 DHX35Q9H5Z1 703 aaKnown RBP22.22■■□□□ 1.15
SPHK1-202ENST00000392496 NRDE2Q9H7Z3 1164 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 RRN3Q9NYV6 651 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 CALCOCO1Q9P1Z2 691 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 FZD10Q9ULW2 581 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 TTC3P53804 2025 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 YJEFN3A6XGL0 299 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 DCDC2CA8MYV0 355 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 E7ENQ6 273 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 FYNP06241 537 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 NUDT17P0C025 328 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 USP17L7P0C7H9 530 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 MNX1P50219 401 aaPredicted RBP22.22■■□□□ 1.15
SPHK1-202ENST00000392496 ATN1P54259 1190 aaPredicted RBP22.22■■□□□ 1.15
SPHK1-202ENST00000392496 EIF3BP55884 814 aaKnown RBP22.22■■□□□ 1.15
SPHK1-202ENST00000392496 TCTN1Q2MV58 587 aa22.22■■□□□ 1.15
SPHK1-202ENST00000392496 P3H1Q32P28 736 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms