RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ELOVL4Q9GZR5 314 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 DERAQ9Y315 318 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 USH1CQ9Y6N9 552 aa19.79■□□□□ 0.76
CCDC50-202ENST00000392456 NCANO14594 1321 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 A0A0A6YYK5 440 aaPredicted RBP19.78■□□□□ 0.76
CCDC50-202ENST00000392456 NVLO15381 856 aaKnown RBP19.78■□□□□ 0.76
CCDC50-202ENST00000392456 SLC2A7Q6PXP3 512 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 RAB3IPQ96QF0 476 aaPredicted RBP19.78■□□□□ 0.76
CCDC50-202ENST00000392456 GAD1Q99259 594 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 SIKE1Q9BRV8 207 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 CCDC28BQ9BUN5 200 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 RNF208Q9H0X6 261 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 NMRK1Q9NWW6 199 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 SNX9Q9Y5X1 595 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 ARVCFO00192 962 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 OAS1P00973 400 aaKnown RBP19.78■□□□□ 0.76
CCDC50-202ENST00000392456 ETS2P15036 469 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 KCNE1P15382 129 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 GPC5P78333 572 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 PTPN11Q06124 597 aaPredicted RBP19.78■□□□□ 0.76
CCDC50-202ENST00000392456 NSUN2Q08J23 767 aaKnown RBP eCLIP19.78■□□□□ 0.76
CCDC50-202ENST00000392456 BCL2A1Q16548 175 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 AGMOQ6ZNB7 445 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 BEST2Q8NFU1 509 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 HAUS1Q96CS2 278 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 BTBD6Q96KE9 485 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 GGT7Q9UJ14 662 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 NME7Q9Y5B8 376 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 FRMPD3Q5JV73 1810 aa19.78■□□□□ 0.76
CCDC50-202ENST00000392456 HCRTO43612 131 aa19.77■□□□□ 0.76
CCDC50-202ENST00000392456 FAM26DQ5JW98 314 aa19.77■□□□□ 0.76
CCDC50-202ENST00000392456 ZNF677Q86XU0 584 aa19.77■□□□□ 0.76
CCDC50-202ENST00000392456 CPNE8Q86YQ8 564 aa19.77■□□□□ 0.76
CCDC50-202ENST00000392456 SLC4A11Q8NBS3 891 aa19.77■□□□□ 0.76
CCDC50-202ENST00000392456 ATXN2LQ8WWM7 1075 aaKnown RBP19.77■□□□□ 0.76
CCDC50-202ENST00000392456 CHST12Q9NRB3 414 aa19.77■□□□□ 0.76
CCDC50-202ENST00000392456 UBQLN1Q9UMX0 589 aaKnown RBP19.77■□□□□ 0.76
CCDC50-202ENST00000392456 TIMM22Q9Y584 194 aa19.77■□□□□ 0.76
CCDC50-202ENST00000392456 ATP8B3O60423 1300 aa19.77■□□□□ 0.76
CCDC50-202ENST00000392456 KBTBD13C9JR72 458 aa19.77■□□□□ 0.75
CCDC50-202ENST00000392456 CILPO75339 1184 aa19.77■□□□□ 0.75
CCDC50-202ENST00000392456 PORP16435 677 aaPredicted RBP19.77■□□□□ 0.75
CCDC50-202ENST00000392456 GM2AP17900 193 aa19.77■□□□□ 0.75
CCDC50-202ENST00000392456 NOMO3P69849 1222 aa19.77■□□□□ 0.75
CCDC50-202ENST00000392456 MAP7Q14244 749 aa19.77■□□□□ 0.75
CCDC50-202ENST00000392456 LIN52Q52LA3 116 aa19.77■□□□□ 0.75
CCDC50-202ENST00000392456 MEI1Q5TIA1 1274 aa19.77■□□□□ 0.75
CCDC50-202ENST00000392456 DAAM2Q86T65 1068 aa19.77■□□□□ 0.75
CCDC50-202ENST00000392456 RNF169Q8NCN4 708 aa19.77■□□□□ 0.75
CCDC50-202ENST00000392456 PIRO00625 290 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 PYGMP11217 842 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 SKIP12755 728 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 CCL5P13501 91 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 CCNB1P14635 433 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 HSPA6P17066 643 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 ATF7P17544 494 aaPredicted RBP19.76■□□□□ 0.75
CCDC50-202ENST00000392456 ADARP55265 1226 aaKnown RBP19.76■□□□□ 0.75
CCDC50-202ENST00000392456 DSC3Q14574 896 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 RCN1Q15293 331 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 MAP7D3Q8IWC1 876 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 WDTC1Q8N5D0 677 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 ADAM2Q99965 735 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 MRPL45Q9BRJ2 306 aaKnown RBP19.76■□□□□ 0.75
CCDC50-202ENST00000392456 OSBPL10Q9BXB5 764 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 RALGAPA2Q2PPJ7 1873 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 SNX3O60493 162 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 CD19P15391 556 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 NFKBIAP25963 317 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 CTNNA1P35221 906 aaKnown RBP19.76■□□□□ 0.75
CCDC50-202ENST00000392456 CDK7P50613 346 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 PSMC1P62191 440 aaKnown RBP19.76■□□□□ 0.75
CCDC50-202ENST00000392456 KRT72Q14CN4 511 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 GRAMD4Q6IC98 578 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 RTN4RL1Q86UN2 441 aaPredicted RBP19.76■□□□□ 0.75
CCDC50-202ENST00000392456 MCOLN2Q8IZK6 566 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.76■□□□□ 0.75
CCDC50-202ENST00000392456 TLCD1Q96CP7 247 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 PPP1R10Q96QC0 940 aaKnown RBP19.76■□□□□ 0.75
CCDC50-202ENST00000392456 NUDCD1Q96RS6 583 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 TBC1D30Q9Y2I9 924 aa19.76■□□□□ 0.75
CCDC50-202ENST00000392456 TMEM110-MUSTN1A8MSY1 372 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 BOLA2-SMG1P6H3BVE0 249 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 ITGA4P13612 1032 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 RRM1P23921 792 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 SKIV2L2P42285 1042 aaKnown RBP19.75■□□□□ 0.75
CCDC50-202ENST00000392456 NDST1P52848 882 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 TNNC1P63316 161 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 CENPCQ03188 943 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 PARP6Q2NL67 630 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 CFAP221Q4G0U5 840 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 SLFN11Q7Z7L1 901 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 LSM14AQ8ND56 463 aaKnown RBP19.75■□□□□ 0.75
CCDC50-202ENST00000392456 ANKK1Q8NFD2 765 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 LPIN3Q9BQK8 851 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 DDX23Q9BUQ8 820 aaKnown RBP19.75■□□□□ 0.75
CCDC50-202ENST00000392456 HEY1Q9Y5J3 304 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 TIMM44O43615 452 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 STAU1O95793 577 aaKnown RBP19.75■□□□□ 0.75
CCDC50-202ENST00000392456 CYP1A2P05177 515 aa19.75■□□□□ 0.75
CCDC50-202ENST00000392456 CYP4X1Q8N118 509 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms