RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 NPNTQ6UXI9 565 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 DEF8Q6ZN54 512 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 COLCA1Q6ZS62 124 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 B4GALNT4Q76KP1 1039 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 TRAPPC11Q7Z392 1133 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 SRGAP1Q7Z6B7 1085 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 UBE2Q1Q7Z7E8 422 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 LIX1LQ8IVB5 337 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 CHPFQ8IZ52 775 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 ZBTB34Q8NCN2 500 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 CCDC150Q8NCX0 1101 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 SLC35G2Q8TBE7 412 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 BCAS4Q8TDM0 211 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 MAP4K1Q92918 833 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 MARK4Q96L34 752 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 MRGPRX1Q96LB2 322 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 HIST1H2AAQ96QV6 131 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 TUBB6Q9BUF5 446 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 HTATIP2Q9BUP3 242 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 B3GNT5Q9BYG0 378 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 DPH1Q9BZG8 443 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 TRIM2Q9C040 744 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 NUAK2Q9H093 628 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 TMEM60Q9H2L4 133 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 DECR2Q9NUI1 292 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 GOLGA6AQ9NYA3 693 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 DNAJB11Q9UBS4 358 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 GABBR1Q9UBS5 961 aa1.59□□□□□ -2.15
SNORD28B-201ENST00000390993 ZNF335Q9H4Z2 1342 aaPredicted RBP1.59□□□□□ -2.16
SNORD28B-201ENST00000390993 FNDC1Q4ZHG4 1894 aaPredicted RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 DPPA5A6NC42 116 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 TRIM43BA6NCK2 446 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 LACTBL1A8MY62 500 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 B4DGG1 531 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 H7C4K7 107 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 GOLIM4O00461 696 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 ADAM10O14672 748 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 PRPF4O43172 522 aaKnown RBP eCLIP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 THAP12O43422 761 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 AKAP10O43572 662 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 RRP9O43818 475 aaKnown RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 CCNT2O60583 730 aaKnown RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 TLR2O60603 784 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 TUSC2O75896 110 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 S100BP04271 92 aaPredicted RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 PDGFRBP09619 1106 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 CTSAP10619 480 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 SFPQP23246 707 aaKnown RBP eCLIP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 TBXAS1P24557 533 aaPredicted RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 RBL1P28749 1068 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 CCKARP32238 428 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 ALDH7A1P49419 539 aaKnown RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 JAK3P52333 1124 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 AGFG1P52594 562 aaKnown RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 ITGA8P53708 1063 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 FAM193AP78312 1265 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 HTRA4P83105 476 aaPredicted RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 PSG6Q00889 435 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 CBFBQ13951 182 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 POLD3Q15054 466 aaPredicted RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 CNGA2Q16280 664 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 CNGA3Q16281 694 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 PTCHD3Q3KNS1 767 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 ZIK1Q3SY52 487 aaPredicted RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 CLEC9AQ6UXN8 241 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 CCDC149Q6ZUS6 474 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 IRF2BP2Q7Z5L9 587 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 TTC30AQ86WT1 665 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 CELF5Q8N6W0 485 aaKnown RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 NRACQ8N912 160 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 PLBD2Q8NHP8 589 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 IL31RAQ8NI17 732 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 ZNF398Q8TD17 642 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 ADAMTS15Q8TE58 950 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 LRTOMTQ8WZ04 291 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 PIGKQ92643 395 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 CENPIQ92674 756 aaPredicted RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 KAT2BQ92831 832 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 TRIM43Q96BQ3 446 aaPredicted RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 NMD3Q96D46 503 aaKnown RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 VCPIP1Q96JH7 1222 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 TAAR9Q96RI9 348 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 EIF3CQ99613 913 aaKnown RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 ACO2Q99798 780 aaKnown RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 SENP7Q9BQF6 1050 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 TMEM204Q9BSN7 226 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 KRTAP1-5Q9BYS1 174 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 FAM234AQ9H0X4 552 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 HIPK2Q9H2X6 1198 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 SLC12A5Q9H2X9 1139 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 ZMAT3Q9HA38 289 aaKnown RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 TMEM184CQ9NVA4 438 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 GAR1Q9NY12 217 aaKnown RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 TMOD4Q9NZQ9 345 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 ZIM2Q9NZV7 527 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 ZNF212Q9UDV6 495 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 HEMK1Q9Y5R4 338 aaPredicted RBP1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 SPATA31A1Q5TZJ5 1347 aa1.58□□□□□ -2.16
SNORD28B-201ENST00000390993 LY6G6EA0A0G2JKS1 128 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms