RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 POPDC2Q9HBU9 364 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 TMPRSS4Q9NRS4 437 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 SAE1Q9UBE0 346 aaPredicted RBP12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 SLC27A5Q9Y2P5 690 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 MYO16Q9Y6X6 1858 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 ADAM12O43184 909 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 FBXO21O94952 628 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 CHRNA3P32297 505 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 PGFP49763 221 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 SLC5A3P53794 718 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 CDH6P55285 790 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 BTG3Q14201 252 aaPredicted RBP12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 SLC25A52Q3SY17 297 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 RNF19BQ6ZMZ0 732 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 MAATS1Q7Z4T9 603 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 FAM131BQ86XD5 332 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 CCDC105Q8IYK2 499 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 CCDC185Q8N715 623 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 SLC2A13Q96QE2 648 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 SNRNP25Q9BV90 132 aaKnown RBP12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 DCLK3Q9C098 648 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 IL23AQ9NPF7 189 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 GDF3Q9NR23 364 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 MRPL42Q9Y6G3 142 aaKnown RBP12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 M0QYT0 321 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 TNFRSF10BO14763 440 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 CAPN9O14815 690 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 ATP8B1O43520 1251 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 ERLIN1O75477 346 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 LTFP02788 710 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 NCAM1P13591 858 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 NOS2P35228 1153 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 CETN2P41208 172 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 PTGIRP43119 386 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 ELAVL2Q12926 359 aaKnown RBP12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 NME3Q13232 169 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 ZNF365Q70YC5 407 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 C12orf50Q8NA57 414 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 RIN2Q8WYP3 895 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 DPH5Q9H2P9 285 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 LRRC19Q9H756 370 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 NFU1Q9UMS0 254 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 PCDHB5Q9Y5E4 795 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 CDY1Q9Y6F8 540 aa12.72□□□□□ -0.37
SPTBN1-203ENST00000389980 OR6C75A6NL08 312 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 POLR3GO15318 223 aaPredicted RBP12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 TBC1D4O60343 1298 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 CAPN15O75808 1086 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 TJP3O95049 919 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 VNN2O95498 520 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 DESP17661 470 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 EPHB4P54760 987 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 COPS2P61201 443 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 NFE2Q16621 373 aaPredicted RBP12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 PPP6R3Q5H9R7 873 aaPredicted RBP12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 JAMLQ86YT9 394 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 IFT20Q8IY31 132 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 SLC7A14Q8TBB6 771 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 HNRNPLLQ8WVV9 542 aaKnown RBP12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 NPY6RQ99463 290 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 CXXC1Q9P0U4 656 aaPredicted RBP12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 PCYOX1Q9UHG3 505 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 USP3Q9Y6I4 520 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 CEP290O15078 2479 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 MTMR11A4FU01 709 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 DAPK3O43293 454 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 CST8O60676 142 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 EFEMP2O95967 443 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 SYN1P17600 705 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 ARSEP51690 589 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 DPYSL3Q14195 570 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 KRT81Q14533 505 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 PPP2R5EQ16537 467 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 USP41Q3LFD5 358 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 BOLA3Q53S33 107 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 BSPRYQ5W0U4 402 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 PM20D1Q6GTS8 502 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 ANKS3Q6ZW76 656 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 RFX6Q8HWS3 928 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 C7orf61Q8IZ16 206 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 PYROXD2Q8N2H3 581 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 FBXO22Q8NEZ5 403 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 MAIP1Q8WWC4 291 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 NT5C3BQ969T7 300 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 YME1L1Q96TA2 773 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 PIGVQ9NUD9 493 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 PRKAG2Q9UGJ0 569 aa12.71□□□□□ -0.37
SPTBN1-203ENST00000389980 KIAA1671Q9BY89 1806 aa12.71□□□□□ -0.38
SPTBN1-203ENST00000389980 TUBBP07437 444 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 IL4RP24394 825 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 MCM3P25205 808 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 PTPN7P35236 360 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 USP46P62068 366 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 GPR17Q13304 367 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 TAZQ16635 292 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 ERMARDQ5T6L9 678 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 STRADAQ7RTN6 431 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 PRUNE1Q86TP1 453 aa12.7□□□□□ -0.38
SPTBN1-203ENST00000389980 FUBP3Q96I24 572 aaKnown RBP eCLIP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms