RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 EFCAB14O75071 495 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 VPS26AO75436 327 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 SOAT2O75908 522 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 HIST2H2ACQ16777 129 aaPredicted RBP10.62□□□□□ -0.71
PKP4-201ENST00000389757 USP41Q3LFD5 358 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 TEDDM1Q5T9Z0 273 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 HIST2H2AA3Q6FI13 130 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 C11orf63Q6NUN7 778 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 LCA5Q86VQ0 697 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 LGI2Q8N0V4 545 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 RIBC1Q8N443 379 aaPredicted RBP10.62□□□□□ -0.71
PKP4-201ENST00000389757 LZTR1Q8N653 840 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 LPPQ93052 612 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 MTBPQ96DY7 904 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 ULBP1Q9BZM6 244 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 RNPEPQ9H4A4 650 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 LRRC40Q9H9A6 602 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 DRG1Q9Y295 367 aaKnown RBP10.62□□□□□ -0.71
PKP4-201ENST00000389757 USP17L7P0C7H9 530 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 PKN3Q6P5Z2 889 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 ZNF557Q8N988 423 aaPredicted RBP10.62□□□□□ -0.71
PKP4-201ENST00000389757 SGSM3Q96HU1 749 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 TBC1D13Q9NVG8 400 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 CDH9Q9ULB4 789 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 C2CD2Q9Y426 696 aa10.62□□□□□ -0.71
PKP4-201ENST00000389757 E2F8A0AVK6 867 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 ANGPT2O15123 496 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 MGEA5O60502 916 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 DUSP11O75319 330 aaKnown RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 ADH1AP07327 375 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 SERPINF2P08697 491 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 PRMT2P55345 433 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 NAA30Q147X3 362 aaPredicted RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 CBWD6Q4V339 395 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 CBWD3Q5JTY5 395 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 CBWD5Q5RIA9 395 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 CELF6Q96J87 481 aaKnown RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 ABCC13Q9NSE7 274 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 CAPN6Q9Y6Q1 641 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 PARP4Q9UKK3 1724 aaKnown RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 BAZ2BQ9UIF8 2168 aaKnown RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 SYNDIG1LA6NDD5 238 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 CHUKO15111 745 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 TLL1O43897 1013 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 PCDH8O95206 1070 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 GRIK3Q13003 919 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 GRAMD1BQ3KR37 738 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 HSDL1Q3SXM5 330 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 ANO5Q75V66 913 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 CLPBQ9H078 707 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 WWOXQ9NZC7 414 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 MARCH2Q9P0N8 246 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 A0A0G2JLL6 359 aaPredicted RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 SLC9A3R1O14745 358 aaPredicted RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 ALDH1A2O94788 518 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 LYPLA2O95372 231 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 ATP5C1P36542 298 aaKnown RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 MROH9Q5TGP6 573 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 ERAP2Q6P179 960 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 SH3BP5LQ7L8J4 393 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 EFL1Q7Z2Z2 1120 aaKnown RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 PRRT2Q7Z6L0 340 aaPredicted RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 UBE2OQ9C0C9 1292 aaKnown RBP10.61□□□□□ -0.71
PKP4-201ENST00000389757 DUSP10Q9Y6W6 482 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 ABCC6O95255 1503 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 UGCGQ16739 394 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 SH3RF1Q7Z6J0 888 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 DSG4Q86SJ6 1040 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 ADAM32Q8TC27 787 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 FAM105AQ9NUU6 356 aa10.61□□□□□ -0.71
PKP4-201ENST00000389757 E5RJQ4 531 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 FZD9O00144 591 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 CAPN15O75808 1086 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 LUC7L3O95232 432 aaKnown RBP10.6□□□□□ -0.71
PKP4-201ENST00000389757 GRM5P41594 1212 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 CASP5P51878 434 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 POU4F1Q01851 419 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 DCLRE1AQ6PJP8 1040 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 ABHD15Q6UXT9 468 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 PPP1R36Q96LQ0 422 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 FAM167BQ9BTA0 163 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 BRD8Q9H0E9 1235 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 ASAH2Q9NR71 780 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 BTBD7Q9P203 1132 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.6□□□□□ -0.71
PKP4-201ENST00000389757 MEFVO15553 781 aaPredicted RBP10.6□□□□□ -0.71
PKP4-201ENST00000389757 CA12O43570 354 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 CLASP2O75122 1294 aaKnown RBP10.6□□□□□ -0.71
PKP4-201ENST00000389757 EEF1B2P24534 225 aaKnown RBP10.6□□□□□ -0.71
PKP4-201ENST00000389757 PPP3CAQ08209 521 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 CCNG2Q16589 344 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 C6orf10Q5SRN2 563 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 ILDR2Q71H61 639 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 RRM2BQ7LG56 351 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 NLRP14Q86W24 1093 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 LRRC6Q86X45 466 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 ACTL9Q8TC94 416 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 ARL8AQ96BM9 186 aa10.6□□□□□ -0.71
PKP4-201ENST00000389757 IL17RAQ96F46 866 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms