RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 CDKL2Q92772 493 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 DEFB118Q96PH6 123 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 CCDC68Q9H2F9 335 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 PIDD1Q9HB75 910 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 FBXO6Q9NRD1 293 aaPredicted RBP19.54■□□□□ 0.72
CSPG5-202ENST00000383738 PCMTD2Q9NV79 361 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 BGNP21810 368 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 RPA3P35244 121 aaPredicted RBP19.54■□□□□ 0.72
CSPG5-202ENST00000383738 NOGQ13253 232 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 KYAT1Q16773 422 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 IRF2BP2Q7Z5L9 587 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 ABRAQ8N0Z2 381 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 ATP11CQ8NB49 1132 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 ARRDC4Q8NCT1 418 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 PDZD8Q8NEN9 1154 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 SOCS4Q8WXH5 440 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 ACO2Q99798 780 aaKnown RBP19.54■□□□□ 0.72
CSPG5-202ENST00000383738 SLC38A7Q9NVC3 462 aa19.54■□□□□ 0.72
CSPG5-202ENST00000383738 ITGB4P16144 1822 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 CRYBG1Q9Y4K1 1723 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 F8VP50 259 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 GSTT1P30711 240 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 HNRNPH3P31942 346 aaKnown RBP19.53■□□□□ 0.72
CSPG5-202ENST00000383738 MMP13P45452 471 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 ART3Q13508 389 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 DUSP28Q4G0W2 176 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 HYIQ5T013 277 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 ZNF483Q8TF39 744 aaPredicted RBP19.53■□□□□ 0.72
CSPG5-202ENST00000383738 TMEM121Q9BTD3 319 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 AIM2O14862 343 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 GPD1P21695 349 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 CAV1Q03135 178 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 ATG16L1Q676U5 607 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 LRRC74BQ6ZQY2 392 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 RNF148Q8N7C7 305 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 LNX1Q8TBB1 728 aaPredicted RBP19.53■□□□□ 0.72
CSPG5-202ENST00000383738 CNBD2Q96M20 576 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 PLEKHA5Q9HAU0 1116 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 NINJ2Q9NZG7 142 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 ALDH1A1P00352 501 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 PTPN4P29074 926 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 FAM13CQ8NE31 585 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 DEPDC1BQ8WUY9 529 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 KRT82Q9NSB4 513 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 PSMC3IPQ9P2W1 217 aaPredicted RBP19.53■□□□□ 0.72
CSPG5-202ENST00000383738 CORO1CQ9ULV4 474 aaPredicted RBP19.53■□□□□ 0.72
CSPG5-202ENST00000383738 CNTRLQ7Z7A1 2325 aa19.53■□□□□ 0.72
CSPG5-202ENST00000383738 TMEM88BA6NKF7 163 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 PCSK7Q16549 785 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 DUPD1Q68J44 220 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 CPNE8Q86YQ8 564 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 FAM172AQ8WUF8 416 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 ZNF570Q96NI8 536 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 FSD1LQ9BXM9 530 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 GGA2Q9UJY4 613 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 APPL1Q9UKG1 709 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 SMG5Q9UPR3 1016 aaKnown RBP19.52■□□□□ 0.72
CSPG5-202ENST00000383738 DHX15O43143 795 aaKnown RBP19.52■□□□□ 0.72
CSPG5-202ENST00000383738 PDE5AO76074 875 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 XPAP23025 273 aaPredicted RBP19.52■□□□□ 0.72
CSPG5-202ENST00000383738 ETFBP38117 255 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 KCTD21Q4G0X4 260 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 MROH9Q5TGP6 573 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 OR6P1Q8NGX9 317 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 UCMAQ8WVF2 138 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 TMEM169Q96HH4 297 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 APOL2Q9BQE5 337 aa19.52■□□□□ 0.72
CSPG5-202ENST00000383738 ZMYND8Q9ULU4 1186 aaPredicted RBP19.52■□□□□ 0.72
CSPG5-202ENST00000383738 O00370 1275 aa19.52■□□□□ 0.71
CSPG5-202ENST00000383738 GIPC1O14908 333 aa19.52■□□□□ 0.71
CSPG5-202ENST00000383738 ETS1P14921 441 aa19.52■□□□□ 0.71
CSPG5-202ENST00000383738 PTK7Q13308 1070 aa19.52■□□□□ 0.71
CSPG5-202ENST00000383738 ECHDC2Q86YB7 292 aa19.52■□□□□ 0.71
CSPG5-202ENST00000383738 PYDC1Q8WXC3 89 aa19.52■□□□□ 0.71
CSPG5-202ENST00000383738 GANQ9H2C0 597 aa19.52■□□□□ 0.71
CSPG5-202ENST00000383738 ST3GAL5Q9UNP4 418 aa19.52■□□□□ 0.71
CSPG5-202ENST00000383738 CASZ1Q86V15 1759 aa19.52■□□□□ 0.71
CSPG5-202ENST00000383738 GTPBP10A4D1E9 387 aaKnown RBP19.51■□□□□ 0.71
CSPG5-202ENST00000383738 APOL1O14791 398 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 PIGHQ14442 188 aaPredicted RBP19.51■□□□□ 0.71
CSPG5-202ENST00000383738 WSCD1Q658N2 575 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 IL31Q6EBC2 164 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 SH3TC2Q8TF17 1288 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 CKAP2Q8WWK9 683 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 LRCH1Q9Y2L9 728 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 DUOX1Q9NRD9 1551 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 PRKCZQ05513 592 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 C10orf120Q5SQS8 335 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 C11orf63Q6NUN7 778 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 ZNF662Q6ZS27 426 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 MCOLN2Q8IZK6 566 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 TMEM120AQ9BXJ8 343 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 ADA2Q9NZK5 511 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 NFASCO94856 1347 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 FECHP22830 423 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 TTC13Q8NBP0 860 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 TTC25Q96NG3 672 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 OLFM3Q96PB7 478 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 NRCAMQ92823 1304 aa19.51■□□□□ 0.71
CSPG5-202ENST00000383738 GOLGB1Q14789 3259 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms