RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 HDCP19113 662 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 WEE1P30291 646 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 GDI1P31150 447 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 RPL34P49207 117 aaKnown RBP16.97■□□□□ 0.31
SNRPB-201ENST00000381342 TUBP50607 506 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 STARD6P59095 220 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 YWHAGP61981 247 aaKnown RBP eCLIP16.97■□□□□ 0.31
SNRPB-201ENST00000381342 CDR2Q01850 454 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 UBXN2BQ14CS0 331 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 ASIC2Q16515 512 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 PTPN20Q4JDL3 420 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 HECTD3Q5T447 861 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 PM20D1Q6GTS8 502 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 ALYREFQ86V81 257 aaKnown RBP16.97■□□□□ 0.31
SNRPB-201ENST00000381342 ZNF677Q86XU0 584 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 VSTM4Q8IW00 320 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 MFSD6LQ8IWD5 586 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 CCDC105Q8IYK2 499 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 TTC16Q8NEE8 873 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 RIN3Q8TB24 985 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 CSGALNACT1Q8TDX6 532 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 STK32AQ8WU08 396 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 CPLX3Q8WVH0 158 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 DNASE1L2Q92874 299 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 ANP32EQ9BTT0 268 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 NUP58Q9BVL2 599 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 SLC4A5Q9BY07 1137 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 EDEM3Q9BZQ6 932 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 RNF38Q9H0F5 515 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 CNGB3Q9NQW8 809 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 TDP1Q9NUW8 608 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 SMPD4Q9NXE4 827 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 NUDT5Q9UKK9 219 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 ZDBF2Q9HCK1 2354 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 A0A1W2PQJ5 194 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 YJEFN3A6XGL0 299 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 E7ENQ6 273 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 MAN2B1O00754 1011 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 MDM4O15151 490 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 LSM8O95777 96 aaKnown RBP16.96■□□□□ 0.31
SNRPB-201ENST00000381342 MBL2P11226 248 aaPredicted RBP16.96■□□□□ 0.31
SNRPB-201ENST00000381342 RARGP13631 454 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 CDH5P33151 784 aaPredicted RBP16.96■□□□□ 0.31
SNRPB-201ENST00000381342 ACADSBP45954 432 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 NOMO3P69849 1222 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 USP4Q13107 963 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 SFMBT2Q5VUG0 894 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 NAA35Q5VZE5 725 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 SPECC1LQ69YQ0 1117 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 ZNF852Q6ZMS4 543 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 TPRG1Q6ZUI0 275 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 IRF2BP2Q7Z5L9 587 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 SCML4Q8N228 414 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 TMEM35BQ8NCS4 154 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 PPP1R13BQ96KQ4 1090 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 LRRC3BQ96PB8 259 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 CYLDQ9NQC7 956 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNRPB-201ENST00000381342 CPQQ9Y646 472 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 COL4A3Q01955 1670 aa16.96■□□□□ 0.31
SNRPB-201ENST00000381342 KMT2EQ8IZD2 1858 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 PAPSS1O43252 624 aaPredicted RBP16.95■□□□□ 0.3
SNRPB-201ENST00000381342 FBXO21O94952 628 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 TBX18O95935 607 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 ERBB2P04626 1255 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 PFKLP17858 780 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 PSEN1P49768 467 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 ZXDBP98169 803 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 ZNF268Q14587 947 aaPredicted RBP16.95■□□□□ 0.3
SNRPB-201ENST00000381342 ZNF77Q15935 545 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 TMEM110Q86TL2 294 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 FMNL3Q8IVF7 1028 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 SCUBE3Q8IX30 993 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 ARHGAP18Q8N392 663 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 CELF5Q8N6W0 485 aaKnown RBP16.95■□□□□ 0.3
SNRPB-201ENST00000381342 OLIG1Q8TAK6 271 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 IQCDQ96DY2 449 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 PIWIL1Q96J94 861 aaKnown RBP16.95■□□□□ 0.3
SNRPB-201ENST00000381342 NOX5Q96PH1 765 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 NACA2Q9H009 215 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 KIF9Q9HAQ2 790 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 SEPT11Q9NVA2 429 aaKnown RBP16.95■□□□□ 0.3
SNRPB-201ENST00000381342 THG1LQ9NWX6 298 aaKnown RBP16.95■□□□□ 0.3
SNRPB-201ENST00000381342 CAPN11Q9UMQ6 739 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 ARHGAP26Q9UNA1 814 aa16.95■□□□□ 0.3
SNRPB-201ENST00000381342 MUC6Q6W4X9 2439 aa16.94■□□□□ 0.3
SNRPB-201ENST00000381342 FAM170BA6NMN3 283 aa16.94■□□□□ 0.3
SNRPB-201ENST00000381342 LTFP02788 710 aa16.94■□□□□ 0.3
SNRPB-201ENST00000381342 DCNP07585 359 aaKnown RBP16.94■□□□□ 0.3
SNRPB-201ENST00000381342 CCDC172P0C7W6 258 aa16.94■□□□□ 0.3
SNRPB-201ENST00000381342 RALAP11233 206 aa16.94■□□□□ 0.3
SNRPB-201ENST00000381342 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
SNRPB-201ENST00000381342 CASP14P31944 242 aa16.94■□□□□ 0.3
SNRPB-201ENST00000381342 MAGEA9P43362 315 aa16.94■□□□□ 0.3
SNRPB-201ENST00000381342 SLC7A9P82251 487 aa16.94■□□□□ 0.3
SNRPB-201ENST00000381342 ZBED6P86452 979 aa16.94■□□□□ 0.3
SNRPB-201ENST00000381342 C10orf120Q5SQS8 335 aa16.94■□□□□ 0.3
SNRPB-201ENST00000381342 FAM183BPQ6ZVS7 135 aa16.94■□□□□ 0.3
SNRPB-201ENST00000381342 ZNF397Q8NF99 534 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms